KEGG   Streptomyces formicae: KY5_5854
Entry
KY5_5854          CDS       T05416                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sfk  Streptomyces formicae
Brite
KEGG Orthology (KO) [BR:sfk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sfk03016]
    KY5_5854
Enzymes [BR:sfk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     KY5_5854
Transfer RNA biogenesis [BR:sfk03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    KY5_5854
 Prokaryotic type
    KY5_5854
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD LSM12_LSM
Other DBs
NCBI-ProteinID: ATL30872
UniProt: A0A291QGZ2
LinkDB
Position
6767526..6768431
AA seq 301 aa
MSNSSTTPDGLVIVDKPSGFTSHDVVAKMRGIAKTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQNTITDDAEGELTSSADASGVTREAIDAGIAKLSGDIMQV
PSKVSAIKIDGKRSYARARKGEDFEIPARPVTVSGFTVYDVREAVADDGTPVLDLVVSVV
CSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLDAAKTLDQLQEELTVMPVAEAAS
RAFPRWDVDDKRGRLLLNGVRIDMPEEYAGQGAVAAFDPEGRFLVLAEESRGKAKSLAVF
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagcaacagcagcaccacgccggacggacttgtcatcgtcgacaagccgtccggcttc
acttcgcacgacgtggtggccaagatgcgcgggatcgccaagacccgccgcgtcggacac
gcgggcaccctcgaccccatggcgacgggcgtcctcgtgctcggcgtggagcgcgccacc
aagctcctcggtcatctggcgctgaccgagaaggagtacctgggcaccatccgcctgggc
cagaacacgatcacggacgacgccgagggcgagctcacctcgtccgccgacgcctccggg
gtcacccgcgaggcgatcgacgcgggcatcgccaagctgtccggcgacatcatgcaggtg
ccctccaaggtcagcgccatcaagatcgacggcaagcggtcgtacgcgcgggcccgcaag
ggcgaggacttcgagatcccggccaggcccgtgacggtctccggcttcacggtgtacgac
gtgcgcgaggccgtcgccgatgacggcacccccgtcctcgatctggtcgtctcggtcgtc
tgctcgtcggggacgtacatcagggcgctcgcccgcgacctcggcgcggacctcggcgtc
ggcgggcacctgaccgcgctgcgccgcacccgcgtcggcccgtacaagctggacgccgcc
aagacgctcgaccagctccaggaggagctgacggtgatgccggtggccgaggccgcgagc
cgcgccttcccgcgctgggacgtggacgacaagcgcggtcggctgctgctcaacggggtg
cggatcgacatgcccgaggagtacgcgggccagggcgccgtcgccgcgttcgaccccgag
ggccgcttcctggtcctcgcggaggagtcgcggggcaaggccaagagcctggccgtcttc
gcctga

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