Streptomyces formicae: KY5_5865
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Entry
KY5_5865 CDS
T05416
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sfk
Streptomyces formicae
Pathway
sfk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KY5_5865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfk03019
]
KY5_5865
03016 Transfer RNA biogenesis [BR:
sfk03016
]
KY5_5865
Enzymes [BR:
sfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KY5_5865
Messenger RNA biogenesis [BR:
sfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KY5_5865
Transfer RNA biogenesis [BR:
sfk03016
]
Prokaryotic type
tRNA degradation factors
KY5_5865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
CdsD_C
Motif
Other DBs
NCBI-ProteinID:
ATL30883
UniProt:
A0A291QHG1
LinkDB
All DBs
Position
6784932..6787148
Genome browser
AA seq
738 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKKPKDQ
LDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEVVAAGLEAAKPFIKVLC
KAQSDLAAKAAKPTGDFPVFLDYQDDVLEALTAAVKTELAQALTIAGKQEREAELDRVKE
IAGEKLLPQFEGREKEISGAYRALTKKLVRERIIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAAVAGIAMGLISQEIDGDTHYVALTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAAQGSQAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKLSL
IPVIEGEEDDDKKDDTDK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcactttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcgtccaagaagcccaaggaccag
ctcgacttcttccccctcacggtggacgtcgaggagcggcagtacgccgcgggcaagatc
cccggttcgttcttccgccgtgagggtcgcccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgtccttccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctgtacgacgtggtcgcgatcaacgcc
gcctcctgctccacgcagctggcgggcctgcccttctcgggcccgatcggcggcacgcgc
gtggcgctcatcaagggccagtgggtcgccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtggtcgccggtcgcgtcctcgaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctggtgaaggacggcgccgaggccccg
accgaagaggtcgtcgccgccggtctggaagccgcgaagcccttcatcaaggtcctctgc
aaggcccagtcggacctcgccgccaaggccgccaagcccaccggcgacttcccggtcttc
ctggactaccaggacgacgtgctcgaggccctgaccgccgcggtcaagaccgagctcgcc
caggcgctcaccatcgcgggcaagcaggagcgcgaggccgagctggaccgcgtcaaggag
atcgccggcgagaagctgctcccgcagttcgagggccgcgagaaggagatctccggtgcc
taccgcgcgctgaccaagaagctggtccgcgagcgcatcatcaaggacaaggtccgcatc
gacggccgcggcgtcacggacatccgtacgctggccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctcgacaccctttccccggtgacgcgcaagcgctac
atgcacaactacaacttcccgccgtactcggtcggtgagaccggccgcgtgggttcgccc
aagcgccgcgagatcggccacggcgccctcgccgagcgcgccatcgtgccggtcctgccg
acgcgcgaggagttcccgtacgcgatccgtcaggtgtccgaggccctcggttccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggccgccgtcgccggcatcgccatgggtctgatctcccaggagatcgacggcgac
acgcactacgtggccctcaccgacatcctcggtgcggaggacgcgttcggtgacatggac
ttcaaggtcgccggtacgaagcagttcgtgaccgcgctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgcgacgcgcgcctgcac
atcctcgacgtgatgaacgaggccatcgacgttccggacgagatgtccccgaacgcgccg
cgcatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgccgcgcagggctcgcaggccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcaccgtcgtgaag
acgacgaccttcggtgcgttcgtctcgctcatgccgggcaaggacggtctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtcctcggt
gtgggccagaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctgtccctc
atccccgtcatcgagggtgaagaggacgacgacaagaaggacgacaccgacaagtga
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