KEGG   Streptomyces formicae: KY5_5887c
Entry
KY5_5887c         CDS       T05416                                 
Name
(GenBank) putative ATP-dependent helicase lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sfk  Streptomyces formicae
Brite
KEGG Orthology (KO) [BR:sfk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfk03400]
    KY5_5887c
Enzymes [BR:sfk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KY5_5887c
    5.6.2.6  RNA 3'-5' helicase
     KY5_5887c
DNA repair and recombination proteins [BR:sfk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KY5_5887c
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C ResIII DUF6406 AAA_25 PhoH
Other DBs
NCBI-ProteinID: ATL30905
UniProt: A0A291QHI9
LinkDB
Position
complement(6821347..6826032)
AA seq 1561 aa
MGGMVRSAPSAPSAHAALDGFSPATRGWFTGAFSAPTDAQAGAWQAIGEGSDVLVVAPTG
SGKTLAAFLAALDQLASTPPPADPKKRCRVLYVSPLKALAVDVERNLRSPLTGIRQESVR
LGLPEPEVRVGIRSGDTPAAERRALSTRPPDILITTPESLFLMLTSAARDALTGIETIIL
DEVHAVAGTKRGAHLALSLERLDQLLPRPARRIGLSATVRPVDEVARYLSPRRKVEIVQP
PSGKEFDLSVVVPVEDLAELGGSPVADSDEGAERPSIWPHVEERITDLVQAHRSTIVFAN
SRRLAERLCNRLNEIAYERATGEALPEDHSPAELMAESGAAKGAPPVLARAHHGSVSKEQ
RAQVEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAV
STGVVFPKYRGDLVQAAVVTERMRTGAIESLRVPANPLDVLAQQLVAMVALDTWQVDDLL
ATVRGAASFASLPESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVAGTVTGRPGAQRLAV
TSGGTIPDRGLFGVFLAGADPKKGGGRVGELDEEMVYESRVGDVFTLGTSSWRIEDITRD
RVLVSPAPGVPGRLPFWKGDQLGRPLELGRALGAFLREVGALPQERARARLLAAGLDAWA
ADNVLTYLAEQREACGHIPDDRTIVVERFRDELGDWRVVVHSPFGAQVHAPWALALGARL
TERYGMDAQVMHADDGIVLRLPDADLMGLDLLDQEPSAPSMEYDAEKAPIGAGDVAFDKG
EVHQIVTDQVGGSALFASRFRECAARALLLPRRSPGKRTPLWQQRQRAAQLLEVASEFGS
FPIVLEAVRECLQDVFDVPGLTELMGDIESRRVRLVEVTTPEPSPFARSLLFGYVAQFLY
EGDSPLAERRAAALSLDSRLLAELLGQAELRELLDAEVLTELEQELQWRTEDRRVKDAEG
VADLLRLLGPLTEGELAERGAEPEWAAELSSARRAIRVRIAGTDHWAAIEDAGRLRDALG
TALPVGVPEAFTEPVKDPLGDLLARFARTHGPFTSAAAAARFGLGAAVTEGALQRLAANG
RVVQGEFHPAGIGQEWCDAAVLRRLRRRSLAALRHELEPVPPAALAQFLPQWQHLGGHGL
RGVDGLVRAVEQLQGATVPASALEKLVLPSRVAGYAPAMLDELTAAGEVVWAGAGSLPGK
DGWVSLYLADAAPLLLPPPHPLELTALHQSVLDALSGGYGLFFRQIADQVRATTHPDATD
PQLADAVWDLTWSGRLTNDTLAPMRSLLGSGRTAGATAHRAKRSIPRGRYGSLTAAARPA
SRTGPPTVAGRWSLLPLREPDPTLRAHALARTLLDRHGVVTRGAVAAEGVEGGFSATYRV
LSAFEDSGQARRGYVVEGLGAAQFAMDGAVDRLRATANSRERSDGSRSSSDTPPAVVLAA
ADPANAYGAALPWPEPPNDAGHKPGRKAGSLVVLVDGELTLYMERGGKSLLAWPTTPESP
IAEDPRLHAAAEALAAAARAGSLGTVTVERVNGTSALTSPFAPLLEGSGFHATPRGLRLR
A
NT seq 4686 nt   +upstreamnt  +downstreamnt
atggggggcatggtcaggtccgcgcccagcgcccccagcgcccacgccgctctcgacggg
ttctccccggcgacccgcggctggttcaccggtgccttctccgcgcccaccgacgcccag
gccggggcgtggcaggcgatcggcgagggctccgacgtgctggtcgtcgcgcccacggga
tccggcaagaccctggccgcgttcctcgccgcgctcgaccagctggcctcgaccccgccg
cccgccgacccgaagaagcgctgccgggtgctgtacgtgtcgccgctcaaggccctcgcg
gtcgacgtggagcgcaatctgcgcagtccgctgaccggcatccgccaggagtcggtgcgc
ctcggccttccggagcccgaggtgcgggtcggcatccgctcgggcgacaccccggccgcc
gagcgcagggctctttcgaccaggccgccggacatcctgatcaccacgcccgagtcgctc
ttcctgatgctgacgtccgccgcgcgggacgcgctgaccggcatcgagacgatcatcctg
gacgaggtgcacgcggtcgcgggcaccaagcgcggcgcccacctggccctgtccttggag
cgcctcgaccagctgctgccgaggcccgcgcgccgcatcgggctttcggcgaccgtgcgg
ccggtggacgaggtggcgcgctatctctccccgcggcgcaaggtggagatcgtccagccg
ccgtccggcaaggagttcgacctgtcggtggtcgtccccgtcgaggacctcgccgagctg
ggaggatccccggtcgccgactccgacgagggcgccgagcgcccctcgatctggccgcac
gtcgaggagcgcatcaccgacctcgtccaggcgcaccgctcgacgatcgtcttcgccaac
tcccgtcgcctggccgagcgcctgtgcaaccgcctgaacgagatcgcgtacgaaagggcc
accggcgaggcgctccccgaggaccactcccccgcggagctgatggccgagtcgggcgcc
gccaagggcgccccgcccgtcctggcccgcgcccaccacggctcggtctccaaggagcag
cgggcacaggtcgaggaggacctcaaggcgggcaggctgcccgccgtggtcgccacgtcc
agcctggagctgggcatcgacatgggcgcggtcgacctggtcgtgcaggtcgagtcgccg
ccgtccgtcgcctccggactgcagcgcgtgggccgggcgggccaccaggtgggcgcggtc
tccacgggagtcgtcttccccaagtaccggggcgacctggtccaggccgccgtcgtcacc
gaacgcatgcgcaccggcgccatcgagtcgctgcgcgtcccggccaaccccctggacgta
ctggcccagcagttggtcgcgatggtcgcgctcgacacctggcaggtcgacgacctcctc
gccacggtccgcggggccgcctcgttcgcctcgctcccggagtcggctttcacggcagta
ctcgacatgctggcgggccgctatccctccgacgccttcgccgagctccgcccgcgcgtg
gtctgggaccgcgtcgcgggcacggtcaccggccgccccggggcacagcgcctcgccgtc
acctccgggggcacgattcccgaccgcggcctcttcggagtcttcctcgcgggcgccgac
cccaagaagggcggcggccgcgtcggggagctcgacgaggagatggtgtacgagtcgcgg
gtgggcgacgtcttcaccctgggcacgagttcctggcgcatcgaggacatcacgcgcgac
cgcgtgctcgtctcccccgcccccggtgtccccggtcggctccccttctggaagggcgac
cagctggggcgccccctcgaactggggcgtgcgctcggcgcgttcctccgggaggtcggg
gcgctcccgcaggagcgggcacgcgcgcgtctcctcgccgcgggcctggacgcctgggcc
gcggacaacgtcctgacctacctcgccgagcagcgagaggcctgcggccacatcccggac
gaccgcacgatcgtcgtcgagcggttccgcgacgagctgggcgactggcgggtcgtcgtg
cactctcccttcggcgcccaggtgcacgccccctgggccctcgcgctcggcgcccgcctc
accgagcggtacggcatggacgcgcaggtcatgcacgccgacgacggcatcgtgctgcgc
ctgcccgacgccgacctgatgggtcttgacctgctcgaccaggagccgagcgcgccctcc
atggagtacgacgccgagaaggcacccatcggcgcgggcgacgtcgccttcgacaagggc
gaggtccaccagatcgtcaccgaccaggtgggcggctcggccctgttcgcctcacgcttt
cgcgagtgcgccgcccgcgcgctgctgcttccgcgccgcagccccggcaagcgcaccccg
ctgtggcagcagcgccagcgcgcggctcaactgctcgaggtggccagcgagttcggttcg
ttcccgatcgtcctcgaagcggtcagggagtgcctccaggacgtcttcgacgtcccgggc
ctcacggaactgatgggggacatcgagtcccgccgcgtccgcctcgtcgaggtcaccacc
cccgagccctcccccttcgcccgctcgctgctcttcgggtacgtggcgcagttcctgtac
gagggcgactcccccctcgccgagcggcgcgcggccgcgctctccctggactcccggctg
ctcgccgagctgctcggccaggcggagctgcgcgagctgctcgacgcggaggtcctcacg
gagctcgagcaggagctccagtggcgtacggaggaccgccgtgtcaaggacgccgagggc
gtcgccgacctgctgcggctcctcgggccgctcacggagggcgagttggccgagcgcggc
gccgagcccgaatgggcggcggagctgtcgtcggcccgtcgtgccatccgggtcaggatc
gccgggaccgaccactgggcggcgatcgaggacgcgggccgcctgcgcgacgccctcggc
actgccctgcccgtgggcgtgcccgaggccttcacggagccggtcaaggacccgctcggc
gacctcctcgcccgcttcgcgcgcacgcacggccccttcacgtcggccgccgcggccgcc
cgcttcggcctcggggctgcggtcacggagggcgcgctgcaacgcctcgcggcgaacggc
cgcgtcgtacaaggagagttccacccggcgggcatcggccaggagtggtgcgacgcggcc
gtcctgcgccgactgcgccgccgctcgctcgcggccctgcggcacgaactggaaccggtg
ccaccggccgcgctcgcccagttcctgccccagtggcagcacctgggcggacacggtctg
cgcggagtcgacggcctggtgcgggccgtcgagcagctccagggcgcgaccgtccccgcc
tccgccctggagaagctcgtgctgccctcccgcgtcgcggggtacgcccccgcgatgctc
gacgaactcaccgcggcgggcgaggtggtctgggccggcgcgggatccctgccggggaag
gatggctgggtctccctctacctggccgacgccgcgcccctgctcctgccgcccccgcac
cccctggagctcaccgcgctgcaccagtccgtcctggacgccctctccgggggctacggc
ctcttcttccgccagatcgccgaccaggtccgcgccaccacccacccggacgccaccgat
ccccaactggccgacgcggtctgggacctgacctggtcgggacggctcacgaacgacacg
ctcgccccgatgcgctcgctgctcggctcgggccgcaccgcgggcgccacggcccaccgc
gccaaacgcagcatcccgcgcgggcgctacggcagcctgaccgccgccgcccgccccgct
tcccgcaccggccccccgacggtcgcgggccgctggtccctgctccccctccgcgaaccc
gaccccaccctgcgcgcccacgccctggcccgcaccctcctcgaccgccacggcgtggtc
acccggggcgcggtcgcggccgaaggcgtcgagggcggcttctcggcgacgtaccgcgtc
ctgtcggccttcgaggacagcggccaggcgcgccgcggctatgtcgtcgaagggctcggc
gccgcccagttcgcgatggacggcgcggtggaccgcctgcgcgccacggcgaactcccgg
gagcgttcggacggttcacgctcctcctccgacaccccgcccgcggtcgtcctcgccgcc
gccgacccggccaacgcctacggagcggccctgccctggcccgagccgcccaacgacgcg
ggccacaagccgggccgcaaggcgggctccctggtcgtcctggtcgacggcgaactgacc
ctctacatggagcgcggcggcaagagcctcctggcctggcccaccactccggagagcccg
atcgccgaggacccccgcctccacgccgccgccgaggccctggccgccgcggcccgcgcg
ggctccctcggcacggtcaccgtcgaacgcgtcaacggcacatccgccctgacctccccc
ttcgcccccctcctggagggctccggcttccacgccaccccacgcggcctacggctgcgt
gcctga

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