Streptomyces formicae: KY5_5956
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Entry
KY5_5956 CDS
T05416
Name
(GenBank) Topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sfk
Streptomyces formicae
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfk03032
]
KY5_5956
03400 DNA repair and recombination proteins [BR:
sfk03400
]
KY5_5956
Enzymes [BR:
sfk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KY5_5956
DNA replication proteins [BR:
sfk03032
]
Prokaryotic type
DNA Topoisomerases
KY5_5956
DNA repair and recombination proteins [BR:
sfk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KY5_5956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ATL30974
UniProt:
A0A291QHL7
LinkDB
All DBs
Position
6912401..6914524
Genome browser
AA seq
707 aa
AA seq
DB search
MTAETSVPSTALLTGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGYCDHIEVILHDDASVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDVEVDRAGHTHAISFRRGVPGAFAKPGPEAAFD
SSATLSKVKKIPKTRSGTRVRYWADRQIFLKDAKLSLEHLHQRARQTAFLVPGLTIVVRD
EFGLGEGGTKGEESFRFDGGISEFCEYLAQDKAVCDVLRLSGQGTFKETVPVLDEHGQMT
PTEVTRELGVDVALRWGTGYDATIRSFVNIIATPKGGTHVTGFERSLTKTMNEVLRSQKL
LRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAANRIVANVIAKELKAFLT
STKRDAKAQARAVMEKAVAAARTRIAARQHKDAQRRKTALESSSLPAKLADCRSDDVERS
ELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKASVSDMLKNAECGAIIQVIGAGS
GRTFDIDAARYGKIILLVDADVDGAHIRILLLTLFQRYMRPMVEAGRVFAAVPPLHRIEL
VQPKKGQDKYIYTYSDRELRETLLEFQRKGVRYKDSIQRYKGLGEMDADQLAETTMDPRY
RTLRRINIGELDSAEQVFDLLMGNDVAPRKEFITKSAATLDRSRIDA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgagacgtccgtgccgtccacagcgttgctgaccggagcagaccgggacggt
tccaactacaccgcgcggcacctgctcgtcctggagggactcgaggccgtccgcaagcgt
ccgggcatgtacatcgggtcgacggacagccgcggcctgatgcactgcctctgggagatc
atcgacaactccgtcgacgaggccctgggcggatactgcgaccacatcgaggtcatcctc
cacgacgacgcctccgtggaggtccgggacaacggccgaggcatccccgtggatgtcgag
cccaagaccggcctctccggagtcgaggtcgtcatgaccaagctgcacgcgggcggaaag
ttcggcggcgggtcgtacgccgcctccggcggtctgcacggcgtgggcgcctccgtggtg
aacgcgctctccgcccgcctcgacgtcgaggtggaccgcgccgggcacacccatgcgatc
agcttccggcgcggtgtcccgggtgctttcgccaagccggggcccgaagcggccttcgac
tcgtcggccacgctgagcaaggtcaagaagatccccaagacccgctccggtacgcgggtg
cggtactgggccgaccgccagatcttcctgaaggacgcgaagctgtcgctggagcatctg
caccagcgggcccggcagaccgccttcctggtgcccggtctgaccatcgtcgtacgtgat
gagttcgggctcggcgagggcggcaccaagggcgaggagtccttccgcttcgatggcggc
atcagcgagttctgcgagtacctggcccaggacaaggccgtgtgcgacgtcctgcggctg
tccgggcagggcaccttcaaggagacggtgccggtcctcgacgagcacggccagatgaca
ccgaccgaggtcacccgtgagctcggtgtggacgtggcgctgcgctggggcaccgggtac
gacgcgacgatcaggtccttcgtcaacatcatcgccacccccaagggcggcacccacgtg
accggtttcgagcgctcgctcaccaagacgatgaacgaggtgctgcgcagccagaagctg
ctgcgcgtggccgaggacgacatcgtcaaggacgacgcccttgagggcctcacggccgtg
gtcacggtccggctcgccgagccgcagttcgagggccagaccaaggaggtgctcggcacc
tcggcggccaaccgcatcgtcgccaacgtgatcgccaaggagctcaaggcgttcctgacc
tccaccaagcgggacgcgaaggcccaggcccgcgcggtgatggagaaggccgtcgccgcg
gcccgtacgcgcatcgcggcccgccagcacaaggacgcccagcgcaggaagaccgctctg
gagtcctcttcgctgcccgcgaagctcgccgactgccgcagtgacgacgtggagcgcagc
gagctcttcatcgtcgagggggactccgcgctcggcaccgccaagctggcccggaactcc
gagttccaggccctgctgccgatccgcggcaagatcctcaacgttcagaaggcatccgtt
tcggacatgctgaagaacgccgagtgcggcgcgatcatccaggtcataggagcggggtcc
ggccggaccttcgacatcgacgcggcgcgctacggcaagatcatcctgctcgtcgacgcc
gacgtcgacggcgcgcacatccgcatcctgctcctcaccctcttccagcggtacatgcgc
ccgatggtggaggccggacgggtcttcgccgccgtgccgcccctgcaccgcatcgagctg
gtccagcccaagaagggccaggacaagtacatctacacgtactccgaccgcgagctgcgc
gagacgctgctcgagttccagcgcaagggcgtgcggtacaaggactcgatccagcggtac
aagggtctgggcgagatggacgccgaccagctggccgagacgacgatggacccgcggtac
cgcacgctgcgccggatcaacatcggcgagctggactccgccgagcaggtcttcgatctg
ctgatgggcaacgacgtcgccccgcgcaaggaattcatcacgaagtccgccgcgacgctg
gaccggtcgcgcatcgacgcgtga
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