Streptomyces formicae: KY5_7028
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Entry
KY5_7028 CDS
T05416
Name
(GenBank) Transcriptional factor in putative operon for degradation of branched-chain alkanes, nitroalkanes and may be also cyclic ketones, alkenoic acids
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
sfk
Streptomyces formicae
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfk03000
]
KY5_7028
Transcription factors [BR:
sfk03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
KY5_7028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
TetR_C_29
TetR_C_4
TetR_C_42
TetR_C_11
TetR_C_6
TetR_C_17
Motif
Other DBs
NCBI-ProteinID:
ATL32046
UniProt:
A0A291QKL0
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All DBs
Position
8189921..8190565
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AA seq
214 aa
AA seq
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MPNPKQQTSKSQTSKKKAQVSPSPERRRELLGIAADVFAEQGYNATTVRKIADAAGMLAG
SLYYHFDSKESMLEEILRTFLTELWDGYDNVLKAQLDPRETLEALVTESFREIDRHRAAV
AIYQKESKHLVAQQRFQYLSDSQQRFEKAWLTTLERGVAEGVFRGDLDIRLAYRFVRDTV
WVAASWYRPGGGHSPEEIARQYLSMVLDGISVRT
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaatcccaaacagcagaccagcaagtcacagaccagtaagaagaaggcccaggtg
agcccctcacccgagcgccgccgcgaactcctcggcatcgccgccgacgtcttcgccgag
caggggtacaacgcgacgacggtccgcaagatcgccgacgccgcgggcatgctcgcgggc
agcctctactaccacttcgactccaaggagtcgatgctcgaagagatcctccgcaccttc
ctcaccgagctgtgggacgggtacgacaacgtgctcaaggcccagctcgacccgcgcgaa
acgctcgaagcgctcgtcaccgagtccttccgggagatcgaccggcaccgcgccgccgtc
gcgatctaccagaaggagtccaagcacctggtcgcccagcagcgcttccagtacctctcc
gactcgcagcagcgcttcgagaaggcctggctcaccacgctggaacggggcgtcgcggaa
ggggtcttccgcggcgacctggacatccggctcgcctaccgcttcgtgcgcgacaccgtc
tgggtcgccgcgtcctggtaccgccccggcggcggccacagccccgaggagatcgcccgc
cagtacctgtcgatggtcctggacggcatctccgtacgcacgtaa
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