Shigella flexneri 301 (serotype 2a): CP0121
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Entry
CP0121 CDS
T00097
Name
(RefSeq) IS100 ORF1
Organism
sfl
Shigella flexneri 301 (serotype 2a)
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Gene cluster
GFIT
Motif
Pfam:
rve
HTH_7
HTH_38
HTH_23
TnsD
Sigma70_r4_2
HTH_29
GerE
HTH_31
HTH_11
HTH_24
HTH_IclR
HTH_26
HTH_3
DNA_pol3_delta_C
HTH_36
YdaS_toxin
HTH_50
Terminase_5
RepB
HTH_40
GcrA
Phage_NinH
HTH_20
HTH_Tnp_ISL3
HTH_35
MerR-DNA-bind
HTH_28
HTH_AsnC-type
rve_3
Sigma70_r4
CENP-B_N
HTH_22
Motif
Other DBs
NCBI-GeneID:
1238074
NCBI-ProteinID:
NP_858254
UniProt:
A0A0H2USD5
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Position
pCP301:complement(101709..102713)
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AA seq
334 aa
AA seq
DB search
MVTFETVMEIKILHKQGMSSRTIARELGLSRNTVKRYLQAKSEPPKYTPRPAVASLLDEY
RDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEP
GRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPR
EVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT
RNSFYIPLMTRLRPMGSTVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML
ALPPEKKEYDVHPGENLVSFDNPVTLFVPLIMGC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtagc
cggacgattgccagagaactggggctctcccgcaataccgttaaacgttatttgcaggca
aaatctgagccgccaaaatatacgccgcgacctgctgttgcttcactcctggatgaatac
cgggattatattcgtcaacgcatcgccgatgctcatccttacaaaatcccggcaacggta
atcgctcgcgagatcagagaccagggatatcgtggcggaatgaccattctcagggcattc
attcgttctctctcggttcctcaggagcaggagcctgccgttcggttcgaaactgaaccc
ggacgacagatgcaggttgactggggcactatgcgtaatggtcgctcaccgcttcacgtg
ttcgttgctgttcccggatacagccgaatgttgtacatcgaattcactgacaatatgcgt
tatgacacgctggagacctgccatcgtaatgcgttccgcttctttggtggtgtgccgcgc
gaagtgttgtatgacaatatgaaaactgtggttctgcaacgtgacgcatatcagaccggt
cagcaccggttccatccttcgctgtggcagttcggcaaggagatgggcttctctccccga
ctgtgtcgccccttcagggcacagactaaaggtaaggtggaacggatggtgcagtacacc
cgtaacagtttttacatcccactaatgactcgcctgcgcccgatggggagcactgtcgat
gttgaaacagccaaccgccacggtctgcgctggctgcacgatgtcgctaaccaacgaaag
catgaaacaatccaggcccgtccctgtgatcgctggctcgaagagcagcagtccatgctg
gcactgcctccggagaaaaaagagtatgacgtgcatcctggtgaaaatctggtgagcttc
gacaaccccgttactttattcgtaccccttataatggggtgttag
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