Shigella flexneri 301 (serotype 2a): CP0123
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Entry
CP0123 CDS
T00097
Symbol
virB
Name
(RefSeq) transcriptional activator VirB
KO
K03497
ParB family transcriptional regulator, chromosome partitioning protein
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfl03000
]
CP0123 (virB)
03036 Chromosome and associated proteins [BR:
sfl03036
]
CP0123 (virB)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfl04812
]
CP0123 (virB)
Transcription factors [BR:
sfl03000
]
Prokaryotic type
Other transcription factors
Others
CP0123 (virB)
Chromosome and associated proteins [BR:
sfl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CP0123 (virB)
Cytoskeleton proteins [BR:
sfl04812
]
Prokaryotic cytoskeleton proteins
MinD / ParA class of bacterial cytoskeletal proteins
CP0123 (virB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ParB
ParBc
SoPB_HTH
HTH_24
Choline_kin_N
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
1237991
NCBI-ProteinID:
NP_858256
UniProt:
P0A247
Structure
PDB
PDBj
LinkDB
All DBs
Position
pCP301:complement(105792..106721)
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AA seq
309 aa
AA seq
DB search
MVDLCNDLLSIKEGQKKEFTLHSGNKVSFIKAKIPHKRIQDLTFVNQKTNVRDQESLTEE
SLADIIKTIKLQQFFPVIGREIDGRIEILDGTRRRASAIYAGADLEVLYSKEYISTLDAR
KLANDIQTAKEHSIRELGIGLNFLKVSGMSYKDIAKKENLSRAKVTRAFQAASVPQEIIS
LFPIASELNFNDYKILFNYYKGLEKANESLSSTLPILKEEIKDLDTNLPPDIYKKEILNI
IKKSKNRKQNPSLKVDSLFISKDKRTYIKRKENKTNRTLIFTLSKINKTVQREIDEAIRD
IISRHLSSS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtggatttgtgcaacgacttgttaagtataaaggaaggccaaaagaaagagtttaca
ctccattctggtaataaagtttcctttatcaaagccaagattcctcataaaaggatccaa
gatttaaccttcgtcaaccaaaaaacgaatgtacgcgatcaagaatccctaacagaagaa
tcattagccgatatcataaaaactataaagctacaacaattcttccctgtaataggaagg
gagattgatggtagaattgaaattctggatggcactcgtagaagagcatctgcaatatat
gcaggagcagatcttgaagttctatattcaaaagaatatatatctactcttgatgccaga
aaactagcaaacgatatacaaacagcaaaagagcatagcatccgagaacttggtattggt
cttaattttctgaaagtatcagggatgtcctataaagacatagccaaaaaagagaatctg
tctcgcgcgaaagtcactcgtgcctttcaggcagcaagcgttccacaggaaataatatct
ctatttccaatcgcgtcagaacttaactttaatgactacaagatattattcaattattat
aaaggacttgaaaaggctaatgaatctcttagttctacactaccaatattaaaggaagaa
ataaaagaccttgatacaaatttgcccccggacatatataaaaaagaaattttaaacatc
ataaagaaaagcaaaaacagaaagcaaaacccttcgctaaaagttgactcgttatttatt
tctaaagacaaacggacttacataaaaagaaaagagaataaaacaaacagaactctaata
tttacattatctaaaataaacaaaacagttcagagagaaatagatgaagctattcgggat
ataatttctcgccatctatcgtcttcataa
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