Shigella flexneri 301 (serotype 2a): SF0176
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Entry
SF0176 CDS
T00097
Symbol
ldcC
Name
(RefSeq) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00310
Lysine degradation
sfl01100
Metabolic pathways
sfl01110
Biosynthesis of secondary metabolites
sfl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SF0176 (ldcC)
Enzymes [BR:
sfl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SF0176 (ldcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-GeneID:
1024434
NCBI-ProteinID:
NP_706131
UniProt:
A0A0H2VUM8
A0AB36P935
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All DBs
Position
200623..202764
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AA seq
713 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQY
TNEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGISTSNKIVGMYAAPSGSTLLI
DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVH
AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVFF
ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVKTAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECRPVAPGEQWHGFNDAD
ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH
DLSGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM
PGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattgccattatgggaccgcatggcgtcttttataaagatgagcccatcaaa
gaactggagtcggcgctggtggcgcaaggctttcagattatctggccacaaaacagcgtt
gatttgctgaaatttatcgaacataaccctcgaatttgcggcgtgatttttgactgggat
gagtacagtctcgatttatgcagcgatatcaatcaacttaatgaatatctcccgctttat
gccttcatcaacacccactcgacgatggatgtcagcgtgcaggatatgcggatggcgctc
tggttttttgaatatgcgctggggcaggcggaagatatcgccattcgtatgcgtcagtac
accaacgaatatcttgataacattacgccgccgttcacgaaagccttgtttacctacgtc
aaagagcggaagtacaccttttgtacgccggggcatatgggcggcaccgcatatcaaaaa
agcccggttggctgtctgttttatgattttttcggcgggaatacccttaaggctgatgtc
tctatttcggtcaccgagcttggttcgttgcttgaccacaccgggccacacctggaagcg
gaagagtacatcgcgcggacttttggcgcggaacagagttatatcgttaccaacggaata
tcgacgtcgaacaaaattgtgggtatgtacgccgcgccatccggcagtacgctgttgatc
gaccgcaactgccataaatcactggcgcatctgttgatgatgaacgatgtagtgccagtc
tggctgaaaccgacgcgtaatgcgttggggattctgggggggatcccgcgccgtgaattt
actcgcgacagcatcgaagagaaagtcgctgccactacgcaagcacaatggccggttcat
gcggtgatcaccaactccacctatgatggtttgctctacaacaccgactggatcaaacag
acgctggatgtcccgtcgatccacttcgattccgcctgggtgccgtatactcattttcat
ccaatctaccagggtaaaagtggtatgagcggcgagcgtgttgcgggaaaagttttcttc
gaaacgcaatcgacccacaaaatgctggcggcgttatcgcaggcttcactgatccacatt
aaaggcgagtatgacgaagaggcgtttaacgaagcctttatgatgcataccaccacctcg
cccagttatcccattgttgcttcggttaagacggcggcggcgatgctgcgtggtaatccg
ggcaaacggctgattaaccgttcggtggagcgggcgctgcattttcgcaaagaggtccag
cggctgcgggaagagtctgacggttggtttttcgatatctggcaaccgccgcaggtggat
gaagccgaatgcaggcccgttgcgcctggcgaacaatggcacggctttaacgatgcggat
gccgatcatatgtttctcgatccggttaaagtcactattttgacaccggggatggacgaa
cagggcaatatgagtgaggaggggatcccggcggcgctggtagcaaaattcctcgacgaa
cgtgggatcgtagtagagaaaaccggcccttataacctgctgtttctctttagtattggc
atcgataaaaccaaagcaatgggattattgcgtgggttgacggaatttaagcgctcttac
gatctcaacctgcggatcaaaaatatgctgcccgatctctatgctgaagatcccgatttc
taccgcaatatgcgtattcaggatctggcgcaagggatccataagctgattcgtaaacac
gatctttccggtttgatgttgcgggcattcgatactttgccggaaatgatcatgacgcca
catcaggcatggcagagacagattaaaggtgaagtagaaaccattgcgctggaacaactg
gtcggtagagtatcggcaaatatgatcctgccttatccaccgggcgtaccgctgttgatg
ccaggagaaatgctgaccaaagagagccgcacggtactcgattttctactgatgctttgt
tccgtagggcaacattaccccggttttgaaacggatattcacggcgcgaaacaggacgaa
gacggcgtttaccgcgtacgagtcctaaaaatggcgggataa
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