Shigella flexneri 301 (serotype 2a): SF0358
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Entry
SF0358 CDS
T00097
Symbol
ispA
Name
(RefSeq) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00900
Terpenoid backbone biosynthesis
sfl01100
Metabolic pathways
sfl01110
Biosynthesis of secondary metabolites
Module
sfl_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SF0358 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sfl01006
]
SF0358 (ispA)
Enzymes [BR:
sfl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SF0358 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SF0358 (ispA)
Prenyltransferases [BR:
sfl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SF0358 (ispA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Arm-DNA-bind_3
Motif
Other DBs
NCBI-GeneID:
1027686
NCBI-ProteinID:
NP_706309
UniProt:
A0A0H2UXE9
A0AB36P996
Structure
PDB
PDBj
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All DBs
Position
complement(369574..370473)
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AA seq
299 aa
AA seq
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MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFG
VSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL
AFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRH
KTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARKKARDLIDDARQALKQLAEQSLDTSALEALADYIIQRNK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggactttccgcagcaactcgaagcctgcgttaagcaggccaaccaggcgctgagccgt
tttatcgccccactgccctttcagaacactcccgtggtcgaaaccatgcagtatggcgca
ttattaggtggtaagcgcctgcgacctttcctggtttatgccaccggtcatatgtttggc
gttagcacaaacacgctggacgcacccgctgctgccgtagagtgtatccacgcttactca
ttaattcatgatgatttaccggcgatggatgatgacgatctgcgtcgcggtttgccgacc
tgccatgtgaagtttggcgaagcaaacgcgattctcgctggcgacgctttacaaacgctg
gcgttctcgattctaagcgatgccaatatgccggaagtgtcggatcgcgacagaatttcg
atgatttctgaactggcgagcgccagcggtattgccggaatgtgcggtggtcaggcatta
gatttagacgcggaaggcaaacacgtacctctggacgcgcttgagcgtattcatcgtcat
aaaaccggcgcattgattcgcgccgccgttcgccttggtgcattaagcgccggagataaa
gggcgtcgtgctctgccagtactcgacaagtacgcagagagcatcggccttgccttccag
gttcaggatgacatcctggatgtggtaggagatactgcaacgttgggaaaacgccagggt
gccgaccagcaacttggtaaaagtacctaccctgcacttctgggtcttgagcaagcccgg
aagaaagcccgggatctgatcgacgatgcccgtcaggcgctgaaacaactggctgaacag
tcactcgatacctcggcactggaagcgctagcggactacatcatccagcgtaataaataa
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