Shigella flexneri 301 (serotype 2a): SF0386
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Entry
SF0386 CDS
T00097
Symbol
ybaU
Name
(RefSeq) periplasmic folding chaperone
KO
K03770
peptidyl-prolyl cis-trans isomerase D [EC:
5.2.1.8
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sfl03110
]
SF0386 (ybaU)
Enzymes [BR:
sfl01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
SF0386 (ybaU)
Chaperones and folding catalysts [BR:
sfl03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
SF0386 (ybaU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SurA_N_3
SurA_N_2
Rotamase_2
Rotamase
Rotamase_3
SurA_N
DUF4214
Motif
Other DBs
NCBI-GeneID:
1027695
NCBI-ProteinID:
NP_706335
UniProt:
A0A0H2VT21
A0AB36P9C0
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Position
397015..398886
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AA seq
623 aa
AA seq
DB search
MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAKVNDQEISRGQFENAFN
SERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQA
IFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGET
DELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLVA
ATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAK
EKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAK
VKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQAAGVKATQTGWFS
KDNLPEELNFKPVADAIFNGGLVGENGASGINSDIITVDGDRAFVLRVSEHKPEAVKPLA
DVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPI
SQAAFALPLPAKDKPSYGMATDMQGNVVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIV
FEALMSNLRKEAKIKIGDALEQQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagcttacgcacggctgcaaacagtctcgtgctcaagattattttcggtatc
attatcgtgtcgttcatattgaccggcgtgagtggttacctgattggcggaggcaataac
tacgccgcaaaagtgaatgaccaggaaatcagccgtgggcagttcgagaacgcctttaac
agcgagcgtaatcgtatgcagcaacagctgggcgatcaatactccgagctggcagcgaac
gaaggctatatgaaaaccctgcgtcaacaggtgctgaatcgtctgatcgacgaggcgctg
ttggatcagtacgctcgtgagctgaaactgggtatcagtgatgagcaggttaaacaggcg
attttcgcgaccccagccttccaggttgacggcaaatttgataacagccgctataacggt
atcctcaaccagatggggatgaccgccgatcagtacgcccaggcgctgcgtaaccagctc
actacccaacagctgattaacggcgttgccggtaccgattttatgctgaaaggtgaaacc
gacgagctggcggcactggtcgcgcaacaacgcgtggtgcgtgaggcgactatcgatgtt
aacgcgctggcggcgaagcagcctgtgaccgaacaggagattgccagctactacgaacaa
aacaaaaacaatttcatgacgccggaacaattccgcgtgagttacatcaagctggttgcc
gcaacgatgcagcaaccggttagcgatgcggatatccagagctactacgatcagcatcag
gatcaattcacccagccgcagcgtacccgctacagcatcatccagaccaaaactgaagat
gaagcgaaagcggtacttgatgagctgaataaaggcggtgattttgctgcattagccaaa
gaaaaatctgccgatattatctctgcccgtaacggcggcgatatgggttggttagaagat
gccactatccccgacgaactgaaaaatgctggtctgaaagaaaaaggccaactgtctggt
gtcatcaaatcttcggtcggtttcctgattgtacgtctggacgacattcagccagcgaaa
gtgaaatcgttagacgaagtacgtgacgacattgcggcgaaagtgaaacacgaaaaagcc
ctcgatgcgtactatgcgctgcagcagaaagtgagcgatgcggcaagcaacgacaccgag
tctctggccggtgcagagcaagctgccggcgttaaagccactcagacgggttggttcagc
aaagataacctgccggaagagttgaacttcaagccggttgccgacgctatctttaacggc
ggtctggtaggtgaaaacggcgcgtcgggcatcaactctgacatcatcaccgtagacggc
gaccgcgcattcgtgctgcgcgtcagcgagcacaaaccggaagcggtgaaaccgttggca
gatgttcaggaacaagttaaggcactggttcagcacaacaaagctgaacaacaggcgaaa
gtggatgctgagaaactgctggttgatttgaaagccggcaaaggtgcggaagctatgcag
gctgccggtctgaaatttggcgagccgaaaaccttaagccgttccggtcgtgacccgatt
agccaggcggcgtttgcactgccactgccagcgaaagacaaaccgagctacggtatggcg
accgatatgcaaggtaatgtggttctgctggcgctggatgaagtgaaacaaggttcaatg
ccggaagatcagaaaaaagcgatggtgcagggtatcacccagaacaacgcacaaatcgtc
tttgaagctctgatgagtaacctgcgtaaagaggcgaaaatcaaaattggcgatgcgctg
gaacagcaataa
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