Shigella flexneri 301 (serotype 2a): SF0445
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Entry
SF0445 CDS
T00097
Symbol
ybbU
Name
(RefSeq) DNA-binding transcriptional repressor AllR
KO
K10973
IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfl03000
]
SF0445 (ybbU)
Transcription factors [BR:
sfl03000
]
Prokaryotic type
Helix-turn-helix
IclR family
SF0445 (ybbU)
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GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
HTH_5
Motif
Other DBs
NCBI-GeneID:
1026034
NCBI-ProteinID:
NP_706392
UniProt:
A0A0H2UXJ7
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Position
462742..463557
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AA seq
271 aa
AA seq
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MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRL
LKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVA
IRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQ
FTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGRVVAAISISGPSS
RLTEDRFVSQGELVRDTARDISTALGLKAHP
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagttagacggcgcggcaggccaggacaggcggagcctgtggcacagaagggc
gcacaggcgttagagcggggaattgcgattctgcaatatctggaaaaaagtgggggaagt
tcgtcggttagcgatatttctctcaatctggatttgccgctctccacgacctttcgcttg
ctgaaggttttacaagcagcggattttgtctatcaggacagtcaattaggctggtggcat
ataggattaggtgtctttaacgtcggtgcggcgtacatccataaccgcgatgtcctctcc
gtcgccgggccgtttatgcgccgcctgatgttactttccggcgaaacggtcaatgtcgcg
atccgtaacggcaatgaagcggtattaattggtcagttagagtgtaaatcgatggtcagg
atgtgtgcgccactgggcagtcgtctgccgctgcatgcttccggtgcgggcaaagcgctg
ctttatccgctggcggaagaggagttgatgagcatcattctgcaaaccggtttgcagcag
tttacgccaactacgcttgtggatatgcccaccttgctgaaggacctggaacaagcgcgt
gaactgggctataccgtagataaagaagagcatgttgtaggtctgaattgcatagcttca
gcaatttacgatgatgtcggtagagttgttgccgctatctccatctccgggccttcatca
agactgacagaagatcgttttgtcagtcagggtgagctggtcagagacaccgcccgcgat
atcagcacggcgttgggactgaaagcacatccatag
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