Shigella flexneri 301 (serotype 2a): SF1423
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Entry
SF1423 CDS
T00097
Symbol
fadD
Name
(RefSeq) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00061
Fatty acid biosynthesis
sfl00071
Fatty acid degradation
sfl01100
Metabolic pathways
sfl01212
Fatty acid metabolism
sfl02024
Quorum sensing
sfl04146
Peroxisome
Module
sfl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SF1423 (fadD)
00071 Fatty acid degradation
SF1423 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SF1423 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SF1423 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sfl01004
]
SF1423 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfl04147
]
SF1423 (fadD)
Enzymes [BR:
sfl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SF1423 (fadD)
Lipid biosynthesis proteins [BR:
sfl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SF1423 (fadD)
Exosome [BR:
sfl04147
]
Exosomal proteins
Exosomal proteins of breast milk
SF1423 (fadD)
Exosomal proteins of breast cancer cells
SF1423 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Motif
Other DBs
NCBI-GeneID:
1024599
NCBI-ProteinID:
NP_707317
UniProt:
A0A0H2UZ87
LinkDB
All DBs
Position
1460476..1462227
Genome browser
AA seq
583 aa
AA seq
DB search
MLTACISFGVAMTTNTHFRGEELKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYAD
QPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAG
IIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLST
AKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT
GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQ
NLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQ
QVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNE
VPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMI
LVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCR
RQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttaacggcgtgtatatcatttggggttgcgatgacgacgaacacgcattttagaggt
gaagaattgaagaaggtttggcttaaccgttatcccgcggacgttccgacggagatcaac
cctgaccgttatcaatctctggtagatatgtttgagcagtcggtcgcgcgctacgccgat
cagcctgcgtttgtgaatatgggggaggtgatgaccttccgcaagctggaagaacgcagt
cgcgcgtttgccgcttatttgcaacaagggttggggctgaagaaaggcgatcgcgttgcg
ttgatgatgcctaacttattgcaatatccggtggcgctatttggcattttgcgtgccggg
ataatcgtcgtaaacgttaacccgttgtataccccgcgtgagcttgagcatcagcttaac
gatagcggcgcatcggcgattgttatcgtgtctaactttgcccacactctggaaaaagtg
gttgataaaaccgccgttcagcacgtaattctgacccgtatgggcgatcagctatctacg
gcaaaaggcacggtagtcaatttcgttgttaaatacatcaagcgcttggtgccgaaatac
catctgccagatgccatttcatttcgtagcgcactgcataacggctaccggatgcagtac
gtcaaacccgaactggtgccggaagatttagccttcctgcaatacaccggcggcaccaca
ggtgtggcgaaaggcgcgatgctgactcaccgcaatatgctggcgaacctggaacaggtc
aacgccacctatgggccgttgctgcatccaggtaaagaactggtagtaacggcactgccg
ctgtatcacatttttgccctgaccattaactgcctgctgtttatcgaactgggtgggcag
aacctgcttatcactaacccgcgtgatattccagggttggtaaaagagttagcgaaatat
ccgtttaccgctatcactggcgttaacaccttgttcaatgcgttgctgaacaataaagag
ttccagcagctggatttctccagtctgcatctttccgcaggcggtgggatgcctgttcag
caagtggtggcagaacgctgggtgaaactgaccggacagtatctgctggaaggttatggc
ctgaccgagtgcgcgccgctggtgagcgttaacccgtatgatattgattatcatagcggt
agcatcggtttgccggtgccatcgacggaagccaaactggtggatgacgacgacaacgaa
gtaccaccgggtcaaccgggtgagctttgtgtcaaaggaccgcaggtgatgctgggttac
tggcagcgtccggatgctacagatgagatcatcaaaaatggctggttacacaccggcgac
atcgcggtgatggatgaagaaggattcctgcgcattgtcgatcgtaaaaaagacatgatt
ttggtttccggttttaacgtctatcccaacgagattgaagatgtcgtcatgcagcatcct
ggcgtacaggaagtcgcggctgttggcgtaccttccggctccagtggtgaagcggtgaaa
atcttcgtagtgaaaaaagatccatcgcttaccgaagagtcactggtgactttttgccgc
cgtcagctcacgggatacaaagtaccgaagctggtggagtttcgtgatgagttaccgaaa
tctaacgtcggaaaaattttgcgacgagaattacgtgacgaagcgcgcggcaaagtggac
aataaagcctga
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