Shigella flexneri 301 (serotype 2a): SF1717
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Entry
SF1717 CDS
T00097
Symbol
ydiJ
Name
(RefSeq) oxidase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00310
Lysine degradation
sfl01100
Metabolic pathways
sfl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SF1717 (ydiJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_20
Fer4_17
Fer4_18
Fer4_10
Motif
Other DBs
NCBI-GeneID:
1024875
NCBI-ProteinID:
NP_707586
UniProt:
A0A0H2UZS7
A0AB36PB01
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All DBs
Position
complement(1748544..1751600)
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AA seq
1018 aa
AA seq
DB search
MIPQISLAPGVVQLVLNFLQELEQQGFTGDAATSYADRLTMSTDNSIYQLLPDAVVFPRS
TADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVDMSRHMNRIIEINPEEGWV
RVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGV
RAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVYQRCRQQRQLIIDNFPKLNRFLT
GYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARLDITRLPKVRRLVNVKYDSFDSALR
NAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDMPDKEMLGLNIVEFAGDDEAL
IDERVNALCVRLDELIASQQAGVIGWQVCRELAGVERIYAMRKKAVGLLGNAKGAAKPIP
FAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKQ
ISDDVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEELFAELRKVKAAFDPHNRLNPGKIC
PPEGLDAPMMKVDAVKRGTFDRQIPIAVRQQWRGAMECNGNGLCFNFDARSPMCPSMKIT
QNRIHSPKGRATLVREWLRLLADRGVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYA
PLMARAPKTFNFFINQPLVRKLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLEAL
NAEQKARTVLVVQDPFTSYYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRF
AKTAKKTADFLNRMAKLGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASAL
ESHPVATVSGESWYFFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHE
AKNHENSLGIYELSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgattccacagatttccctggcacccggcgtcgttcaactggtgcttaattttttgcaa
gagctggagcaacaaggttttaccggcgatgcggcgacaagttatgccgatcgtctgaca
atgtcgaccgacaacagtatttaccaacttctccccgatgcggtggtatttccgcgttca
accgcagatgtggcgctgatcgcccgtcttgccgcgcaggaacgctattcatcgctgatc
tttaccccccgcggcggcggcaccggcactaacggtcaggcgctcaaccaggggattatt
gttgatatgtcccgccatatgaaccgcatcatcgaaattaaccctgaagagggctgggtg
cgcgttgaggccggggtgataaaagaccaactcaatcagtacctgaaaccgttcggctac
ttttttgcgccggaactttcgaccagcaaccgggcaacgctcggtgggatgatcaatacc
gatgcatccggtcagggatcgctggtctatggcaaaacgtcagatcacgtacttggcgta
cgcgcggtgttgttggggggcgatattctcgatacgcaacctttacccgtcgagctggcg
gaaacgctgggtaaatccaataccacaatcgggcgaatttataacacggtttatcaacgt
tgccgtcagcaacgccagttaatcatcgacaacttccccaaacttaaccgctttcttacc
ggttacgatctgcgtcatgtctttaacgatgagatgaccgagttcgacctgacgcgcatt
ctgacgggttcagaagggacgctggcctttattaccgaagcgcggctggatattacgcgc
ttgcctaaagtgcgccgtctggtgaatgtcaaatatgactcttttgactctgcgctgcgt
aacgcgccgtttatggttgaggcgcgggcgctttcggtagagacggtggactcaaaagtg
ctgaatctggcgcgggaagatattgtctggcattccgtcagcgagttgattaccgatatg
cctgacaaagagatgctcggactgaacattgtggaatttgctggtgatgatgaggcgctg
attgacgagcgagttaatgcactctgtgtgcggcttgatgagctgattgccagccaacag
gcaggtgtgattggctggcaggtgtgccgcgagctggcgggggttgaacgtatctatgcg
atgcgcaaaaaagccgttggtctgcttggcaatgccaaaggtgccgctaagccaattccg
tttgctgaggatacctgcgtaccgccggaacatctggccgattatattgctgaatttcgc
gcgctgctcgacagccacggcttaagctacggtatgttcggtcacgtcgacgcaggtgtc
ttgcacgtccgtccggcactggatatgtgcgatccgcaacaagagattttgatgaagcaa
atctctgatgacgtggtggcgctgactgcgaaatacggtggtttgttgtggggcgagcac
ggcaaaggttttcgcgctgaatacagcccggcgtttttcggtgaggaactttttgcagaa
ctgcgcaaagtgaaagcggcatttgacccgcataaccgactcaacccagggaagatttgc
ccgccagaaggtctcgatgcgccgatgatgaaagtggacgcggtgaagcgcggtacattc
gatcggcagatccccattgcggtacgccagcagtggcgcggtgcgatggagtgtaacggc
aacggtttatgcttcaactttgatgcccgtagtccgatgtgtccgtcgatgaagatcacc
cagaaccggattcattcaccgaaagggcgcgcaacgctggtgcgtgaatggctgcgcttg
ttggcggatcgcggcgttgacccactcaaactggaacaagaactgcctgaatccggcgtc
agtttgcggacgttaattgcccgcacgcgcaatagctggcatgcgaataaaggcgaatat
gacttctcacacgaagtcaaagaggcgatgtcgggctgtctggcctgtaaagcttgttcg
acccagtgccccatcaaaattgatgtgccggagtttcgctctcgttttctgcagctctat
cacacccgttatttacgcccgcttcgcgaccacctcgttgctacggtcgagagctacgca
ccgctgatggcacgcgcgccgaaaacctttaacttcttcattaaccagccgctggtgcgc
aaactctcggaaaaacatatcggcatggttgatttgccactgctgtcggtcccctcgcta
caacaacaaatggtggggcatcgctcggcaaacatgacgctggaacagcttgaagctctc
aatgcagagcagaaagcgcgcacggtgttggtggtgcaggacccctttaccagctattac
gatgcgcaagtggtggcggattttgtccgtctggttgaaaaattaggtttccagcctgtg
ttactgccattttcgccaaatggcaaagcccagcatatcaaaggctttcttaatcgtttt
gcgaagacggcgaaaaagacggcggatttcctcaaccgtatggctaagcttgggatgcca
atggtgggcgtcgatccggcgctggtactttgttatcgcgatgaatataaactggcgctg
ggcgaggaacgtggcgagtttaacgtcttacttgcgaatgaatggctggcaagcgcactt
gagtcacatccagtggctacagtcagcggtgaatcatggtatttctttggtcactgtacc
gaggttaccgctttgccgggcgcgccagcacaatgggccgcgatatttgcccgttttggc
gcgaaactggaaaatgtcagcgtgggttgctgcggcatggcagggacttacggacatgaa
gcgaaaaaccatgaaaattcgctcgggatctatgagttatcctggcatcaggctatgcag
cgactgccgcgtaaccgctgtctggcgaccggatattcctgccgtagccaggtaaaacgg
gttgaaggcacgggggtacgccatcctgtgcaggctttactggagattattaaatga
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