Shigella flexneri 301 (serotype 2a): SF1825
Help
Entry
SF1825 CDS
T00097
Symbol
ydaO
Name
(RefSeq) tRNA 2-thiocytidine biosynthesis protein TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfl03016
]
SF1825 (ydaO)
Transfer RNA biogenesis [BR:
sfl03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SF1825 (ydaO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
ThiI_fer
Motif
Other DBs
NCBI-GeneID:
1025014
NCBI-ProteinID:
NP_707683
UniProt:
Q83KS7
A0AB36PCH1
LinkDB
All DBs
Position
1863182..1864117
Genome browser
AA seq
311 aa
AA seq
DB search
MSQNQEISKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILR
NLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKIVEENTYGIVKEKIPEGKT
TCSLCSRLRRGILYRTATELGTTKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDG
KHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIE
TMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGDLAFDREEIPLQPAGWQPEEDENQL
DELRLNVVEVK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaattacaaaaa
cgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgat
cgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgc
aatttgcagcaaagcgcgccaatcaatttttcgctggtggctgttaacctcgatcaaaag
caaccgggcttcccggaacacgttctgcccgagtatcttgaaaagctgggcgttgagtac
aagattgttgaagagaacacttacggtatcgtgaaagagaagattccagagggcaaaacc
acttgctcactgtgttctcggctacgtcgcggtatcctttatcgcaccgcaacggaactg
gggacgacgaagatcgcgttgggtcaccatcgtgacgatatcctgcaaacgttgttctta
aatatgttctacggcggcaagatgaaaggtatgcctccgaaactgatgagcgatgatggc
aaacatatcgttattcgtccactggcctactgccgcgagaaagatattcagcgatttgcc
gatgcaaaagcgttcccgattattccgtgcaacctgtgcggttcacagcctaacctgcaa
cgtcaggtgattgctgacatgttgcgtgactgggataaacgttatccagggcgtatcgag
acgatgttcagcgcgatgcagaatgtggtgccgtcgcatctgtgcgataccaacctgttc
gatttcaaaggcattacccacggttctgaagtggttaacgggggtgatctggcgtttgat
cgcgaagagatcccactacaaccggcgggctggcagccagaagaagatgaaaatcagttg
gatgagttacggctgaatgtggttgaagtgaaataa
DBGET
integrated database retrieval system
