Shigella flexneri 301 (serotype 2a): SF2005
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Entry
SF2005 CDS
T00097
Symbol
dcm
Name
(RefSeq) DNA cytosine methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00270
Cysteine and methionine metabolism
sfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SF2005 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfl03000
]
SF2005 (dcm)
03032 DNA replication proteins [BR:
sfl03032
]
SF2005 (dcm)
03036 Chromosome and associated proteins [BR:
sfl03036
]
SF2005 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sfl02048
]
SF2005 (dcm)
Enzymes [BR:
sfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SF2005 (dcm)
Transcription factors [BR:
sfl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SF2005 (dcm)
DNA replication proteins [BR:
sfl03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SF2005 (dcm)
Chromosome and associated proteins [BR:
sfl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SF2005 (dcm)
Prokaryotic defense system [BR:
sfl02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SF2005 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DNA_meth_N
LisH_WDR26
Motif
Other DBs
NCBI-GeneID:
1025261
NCBI-ProteinID:
NP_707844
UniProt:
A0A384KIQ0
A0AB36PDW4
LinkDB
All DBs
Position
complement(2030765..2032183)
Genome browser
AA seq
472 aa
AA seq
DB search
MQENISVTDSYSTGNAAQAMLEKLLQIYDVKMLVAQLNGVGENHWSAAILKRALANDSAW
HRLSEKEFAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHA
VRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPF
SLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDKGKTFRI
IMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDIS
ECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVT
RTLSARYYKDGAEILIDRGWDMATGEKDFDDPLNQQHRPRRLTPRECARLMGFEAPGEAK
FRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQQEAQHGRRSR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaatatatcagtaaccgattcatacagcaccgggaatgccgcacaggcaatg
ctggagaaactgctgcaaatttatgatgttaaaatgctggtggcgcagcttaatggtgtg
ggtgagaatcactggagcgcggcaattttaaaacgtgcgctggcgaatgactcggcatgg
caccgtttaagtgagaaagagtttgcccatctgcaaacgttgttacccaaaccaccggaa
catcatccgcattatgcgtttcgctttatcgatctatttgccggaattggcggcatccgt
cgtggttttgaatcgattggtggacagtgcgtgtttaccagcgaatggaacaaacatgcg
gtacgcacttataaagccaaccattattgcgacccggcgacgcatcattttaatgaagat
atccgcgacatcaccctcagtcatcaagaaggcgtgagtgatgaggcggcggcggaacat
attcgtcaacacattcctgaacacgatgttttactggccggtttcccttgtcagccattt
tcgctggctggcgtatcgaaaaagaactcgctcgggcgggcgcacggttttgcctgcgat
acccagggcacgctgttctttgatgtggtgcgcattatcgacgcgcgtcgtccggcgatg
tttgtgctcgaaaacgtcaaaaacctgaagagtcacgataagggaaaaacgttccgcatc
atcatgcagacgctggacgaactgggctatgacgttgccgatgcagaagataacgggccg
gacgatccgaaaatcatcgatggtaaacatttcctgccgcagcaccgtgaacgcatcgtg
ctggtgggttttcgtcgcgatctgaatctgaaagccgattttactctgcgtgatatcagc
gaatgtttccctgcacagcgagtgacgctggcgcagctgctggacccgatggttgaggcg
aaatatatcctgacgccggtgctgtggaagtacctctatcgatatgcgaaaaaacatcag
gcgcgcggtaacggcttcggttatggaatggtttatccgaacaatccgcaaagcgtcacc
cgtacgctgtctgctcgttattacaaagatggcgcggaaattttaatcgatcgcggttgg
gatatggccacgggtgagaaagactttgacgatccgctgaatcagcaacatcgtccacgt
cggttaacgcctcgtgaatgcgcgcgcttaatgggttttgaagcgccgggagaagcgaaa
ttccgcattccggtttcggacactcaggcctatcgccagttcggcaactcggtggtcgtg
ccggtctttgccgcggtggcaaaactgcttgagccaaaaatcaaacaggcggtggcgttg
cgtcagcaagaggcacaacatggtcgacgttcacgataa
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