Shigella flexneri 301 (serotype 2a): SF2099
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Entry
SF2099 CDS
T00097
Symbol
rfbF
Name
(RefSeq) dTDP-rhamnosyl transferase
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SF2099 (rfbF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfl01005
]
SF2099 (rfbF)
Lipopolysaccharide biosynthesis proteins [BR:
sfl01005
]
O-antigen repeat unit
SF2099 (rfbF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_trans_2_3
Motif
Other DBs
NCBI-GeneID:
1026771
NCBI-ProteinID:
NP_707931
UniProt:
P37782
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Position
complement(2113025..2113915)
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AA seq
296 aa
AA seq
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MNSNIYAVIVTYNPELKNLNALITELKEQNCYVVVVDNRTNFTLKDKLADIEKVHLICLG
RNEGIAKAQNIGIRYSLEKGAEKIIFFDQDSRIRNEFIKKLSCYMDNENAKIAGPVFIDR
DKSHYYPICNIKKNGLREKIHVTEGQTPFKSSVTISSGTMVSKEVFEIVGMMDEELFIDY
VDTEWCLRCLNYGILVHIIPDIKMVHAIGDKSVKICGINIPIHSPVRRYYRVRNAFLLLR
KNHVPLLLSIREVVFSLIHTTLIIATQKNKIEYMKKHILATLDGIRGITGGGRYNA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtaatatttacgctgtcattgtgacatataatcccgaacttaaaaatctgaat
gcactgatcactgaactaaaggagcaaaattgttacgttgtagtagtcgataataggact
aatttcaccttgaaagataaattagcagacattgaaaaagttcatttaatttgtcttggt
aggaatgaaggtatagcaaaagcacaaaatattgggattcgatattctcttgaaaaaggg
gcagagaagataattttttttgatcaagatagccgtattcgcaatgagtttatcaaaaaa
ctttcctgctatatggataatgaaaatgcaaaaatagctggcccagtttttattgataga
gataagtcacattattatcctatttgtaatatcaaaaaaaatggtcttcgagagaaaatt
catgtcactgaaggacagacaccgtttaaaagttcagtaacaatctcatccggaaccatg
gtttcaaaagaagtttttgagattgttggaatgatggatgaggaactttttattgattat
gtcgatacagaatggtgtcttagatgcttaaactatggcatattagttcatatcattcct
gatataaaaatggttcatgctattggggataagtcagtaaaaatctgtgggattaacata
ccaattcactcgccagtacgtcgttattatcgagtaagaaatgcatttcttttgcttaga
aaaaatcatgtgcctcttttactctctattagggaagttgttttttctttaattcatacg
actttaattatcgcaactcaaaaaaataaaattgaatatatgaaaaaacatattttggct
acgctggatggaataagaggaattactgggggcggtcgttataatgcatag
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