Shigella flexneri 301 (serotype 2a): SF2101
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Entry
SF2101 CDS
T00097
Symbol
rfbC
Name
(RefSeq) dTDP-6-deoxy-L-mannose-dehydrogenase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00521
Streptomycin biosynthesis
sfl00523
Polyketide sugar unit biosynthesis
sfl00541
O-Antigen nucleotide sugar biosynthesis
sfl01100
Metabolic pathways
sfl01110
Biosynthesis of secondary metabolites
sfl01250
Biosynthesis of nucleotide sugars
Module
sfl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SF2101 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SF2101 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SF2101 (rfbC)
Enzymes [BR:
sfl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SF2101 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-GeneID:
1026775
NCBI-ProteinID:
NP_707933
UniProt:
P37780
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All DBs
Position
complement(2115217..2115762)
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AA seq
181 aa
AA seq
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MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKSTKGVLRG
LHYQLEPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHG
FCVLSDEAEFVYKTNNFYSKMQERGILWSDKSINIEWPVQNPLLSDKDINGQKFVDADYF
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattaaaactgaaattcctgatgtgctaatttttgaaccaaaagtatttggt
gatgagcggggcttttttatggaaagcttcaatcagaaagttttcgaagaggctgtagga
cgaaaggttgagtttgttcaggataaccattctaaatcaactaagggtgtgttacgcgga
ctgcactatcagctggaaccttatgctcaaggaaaactggtacgctgtgttgtcggtgaa
gtttttgacgtagctgttgatattcggaaatcatcaccaacatttggcaagtgggttggt
gtaaatttgtcggcggagaataagcgtcaattatggataccggaaggattcgctcatggg
ttttgcgttcttagtgatgaagcagaatttgtctacaaaacaaataatttctattcaaaa
atgcaagagcgtgggattttatggagcgacaaaagtataaatatagaatggccggttcaa
aatccattgctttctgataaagatattaatggtcaaaaatttgtagatgctgattatttt
atatga
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