Shigella flexneri 301 (serotype 2a): SF2116
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Entry
SF2116 CDS
T00097
Symbol
gmd
Name
(RefSeq) GDP-D-mannose dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00051
Fructose and mannose metabolism
sfl00541
Biosynthesis of various nucleotide sugars
sfl01100
Metabolic pathways
sfl01250
Biosynthesis of nucleotide sugars
Module
sfl_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
SF2116 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SF2116 (gmd)
Enzymes [BR:
sfl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
SF2116 (gmd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Glyco_transf_4
DUF6715
adh_short
NmrA
Motif
Other DBs
NCBI-GeneID:
1026781
NCBI-ProteinID:
NP_707948
UniProt:
P0AC91
LinkDB
All DBs
Position
complement(2132812..2133933)
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AA seq
373 aa
AA seq
DB search
MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL
HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL
GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYAC
NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM
LQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKP
GDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLL
KSHGYDVAIALES
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtcgctctcatcaccggtgtaaccggacaagacggttcttacctggcagag
tttctgctggaaaaaggttacgaggtgcatggtattaagcgtcgcgcatcgtcattcaac
accgagcgcgtggatcacatttatcaggatccgcacacctgcaacccgaaattccatctg
cattatggcgacctgagtgatacctctaacctgacgcgcattttgcgtgaagtacagccg
gatgaagtgtacaacctaggcgcaatgagccacgttgcggtctcttttgagtcaccagaa
tataccgctgacgtcgacgcgatgggtacgctgcgcctgctggaggcgatccgcttcctc
ggtctggaaaagaaaactcgtttctatcaggcttccacctctgaactgtatggtctggtg
caggaaattccgcagaaagaaaccacgccgttctacccgcgatctccgtatgcggtcgcc
aaactgtacgcctactggatcaccgttaactaccgcgaatcctacggcatgtacgcttgt
aacggaattctcttcaaccatgaatccccgcgccgcggcgaaaccttcgttacccgcaaa
atcacccgcgcaatcgccaacatcgcccaggggctggagtcgtgcctgtacctcggcaat
atggattccctgcgtgactggggccacgccaaagactacgtaaaaatgcagtggatgatg
ctgcaacaggaacagccggaagatttcgttatcgcgaccggcgttcagtactccgtacgt
cagtttgtggaaatggcggcagcacagctgggcatcaaactgcgctttgaaggcacgggt
gttgaagagaagggcattgtggtttccgtcaccgggcatgacgcgccgggcgttaaaccg
ggtgatgtgattatcgccgttgatccgcgttacttccgtccggcagaagttgaaacgctg
ctcggcgacccgaccaaagcgcacgaaaaactgggctggaaaccggaaatcaccctcaga
gagatggtgtctgaaatggtggctaatgacctcgaagcggcgaaaaaacactctctgctg
aaatctcacggctacgacgtggcgatcgcgctggagtcataa
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