Shigella flexneri 301 (serotype 2a): SF2394
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Entry
SF2394 CDS
T00097
Symbol
truA
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfl03016
]
SF2394 (truA)
Enzymes [BR:
sfl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SF2394 (truA)
Transfer RNA biogenesis [BR:
sfl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SF2394 (truA)
Prokaryotic type
SF2394 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
1025534
NCBI-ProteinID:
NP_708200
UniProt:
Q83QR3
A0AB36PFH6
LinkDB
All DBs
Position
complement(2442935..2443747)
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AA seq
270 aa
AA seq
DB search
MSDQQQLPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTD
AGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRY
IIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMH
INVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATA
KAEGLYLVAVDYPDRYDLPKPPMGPLFLAD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccagcaacaactgccagtttataaaattgcgctgggcattgagtacgacggc
agtaagtattacggctggcaacggcagaatgaagtccgcagtgtgcaggagaagctggaa
aaggcgctctcccaggtggcgaacgaacccatcaccgtcttctgcgccgggcgtactgac
gcaggggtacacggtaccgggcaagtggtgcatttcgaaacaaccgcgcagcgcaaagac
gcggcgtggaccttgggcgtaaatgcgaatttacctggtgacatcgccgtgcgttgggtt
aaagctgtacctgatgattttcatgcccgatttagcgccacggctcgccgttatcgctac
atcatctacaatcatcggctgcgcccggcggtactgagtaaaggggtaacccatttttac
gaaccgctggacgctgaacggatgcatcgggctgcgcaatgcttgctgggcgagaatgat
ttcacctcgttccgtgcggtgcagtgccagtcccgaaccccgtggcgcaacgttatgcat
attaatgtcacgcgtcacggtccttatgtggtggttgatatcaaagcgaatgcctttgta
catcatatggtcaggaatattgtcggcagcctgatggaagtcggtgcccacaaccagccg
gagagctggatagcagagttgctggcggcaaaggacagaacgctggcggcagcaacggca
aaagcggaagggctgtatctggtcgcggtggattaccctgaccggtatgatcttccaaaa
ccgccaatgggcccgctatttctggcggactaa
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