Entry |
|
Symbol |
srmB
|
Name |
(RefSeq) ATP-dependent RNA helicase SrmB
|
KO |
|
Organism |
sfl Shigella flexneri 301 (serotype 2a)
|
Brite |
KEGG Orthology (KO) [BR:sfl00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:sfl03009]
SF2638 (srmB)
Enzymes [BR:sfl01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SF2638 (srmB)
Ribosome biogenesis [BR:sfl03009]
Prokaryotic type
rRNA helicases
SF2638 (srmB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2710110..2711444
|
AA seq |
444 aa
MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV
HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL
GKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRH
RDTKNIGKRRKPSGTGVPPQTTEE |
NT seq |
1335 nt +upstreamnt +downstreamnt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggaagccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccacgtaagaaatccggtccgccgcgtattttg
atcctcaccccaactcgcgagctggcgatgcaggtggccgatcatgcccgcgaactggcg
aaacatacgcatctggatatcgccaccatcaccggcggcgtagcctatatgaaccacgcg
gaagtgttcagcgaaaatcaggacatcgtggtcgccacgaccggacgtctgctgcaatac
ataaaagaagagaacttcgattgccgcgcggttgaaacgctgatcctcgacgaagcagac
cgtatgctggatatgggcttcgctcaggatatcgaacatattgctggcgaaactcgctgg
cgtaaacagaccctgctcttttcggcaacgctggaaggcgatgcgattcaggactttgcc
gagcgtctgctggaagatccggtggaagtttctgccaatccgtccacccgtgagcgcaaa
aaaattcatcagtggtattaccgcgccgatgacctggaacataaaaccgcattgctggtg
cacctgttaaaacagcctgaagcgactcgctcaatcgtgtttgtgcgtaagcgtgaacgt
gtgcatgagctggcaaactggctgcgcgaagcgggcatcaacaactgctatctcgaaggt
gagatggtacaaggcaagcgtaacgaagcaattaaacgcctgaccgaaggccgcgtaaac
gtactggttgccaccgatgttgccgcgcgcggtatcgacattcctgacgtcagccacgtc
tttaacttcgatatgccgcgcagtggcgatacttatttgcatcgtatcggacgtaccgcg
cgcgccggtcgtaaaggcaccgcaatttcgctggtggaagcccatgaccatttgctgctg
ggcaaggttggccgttacattgaagagccgattaaagctcgcgttattgatgagttacgc
ccgaaaacgcgtgcgccaagcgagaagcagaccggcaagccatcgaagaaagtactggca
aaacgcgccgagaagaaaaaagctaaagagaaagagaagccgcgggtgaaaaaacgccat
cgcgacaccaaaaatattggtaagcgccgtaaaccgagcggaacgggcgtgccaccgcaa
acgacagaagagtaa |