Shigella flexneri 301 (serotype 2a): SF2720
Help
Entry
SF2720 CDS
T00097
Symbol
alaS
Name
(RefSeq) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SF2720 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfl01007
]
SF2720 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfl03016
]
SF2720 (alaS)
Enzymes [BR:
sfl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
SF2720 (alaS)
Amino acid related enzymes [BR:
sfl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SF2720 (alaS)
Transfer RNA biogenesis [BR:
sfl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SF2720 (alaS)
Prokaryotic type
SF2720 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
DUF1319
Leu_zip
Hydro_N_hd
DUF7491
Motif
Other DBs
NCBI-GeneID:
1025713
NCBI-ProteinID:
NP_708505
UniProt:
Q7UBU3
LinkDB
All DBs
Position
complement(2792880..2795510)
Genome browser
AA seq
876 aa
AA seq
DB search
MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYS
RATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKW
FALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCG
PCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMG
LERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVM
PSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVL
KTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKV
DEAGFEAAMEEQRRRAREASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAV
DAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLAAG
SLKVGDAVQADIDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSH
NEAMKPEEIRAVEDLVNAQIRRNLPIETNIMNLEAAKAKGAMALFGEKYDERVRVLSMGD
FSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHL
LKGDSNNLADKVRSVLERTRQLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSG
VEPKMLRTMVDDLKNQLGSTIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVG
GKGGGRPDMAQAGGTDAAALPAALASVKGWVSAKLQ
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagagcaccgctgagatccgtcaggcgtttctcgactttttccatagtaaggga
catcaggtagttgccagcagctccctggtaccccataacgacccaactttgttgtttacc
aacgccgggatgaaccagttcaaggatgtgttccttgggctcgacaagcgtaattattcc
cgcgctaccacttcccaacgctgcgtgcgtgcgggtggtaaacacaacgacctggaaaac
gtcggttacaccgcgcgtcaccataccttcttcgaaatgctgggcaacttcagcttcggc
gactatttcaaacacgatgccattcagtttgcatgggaactgctgaccagcgaaaaatgg
tttgccctgccgaaagagcgtctgtgggttaccgtctatgaaagcgacgacgaagcctac
gaaatctgggaaaaagaagtcgggatcccgcgcgaacgtattattcgcatcggcgataac
aaaggtgcgccatacgcatctgacaacttctggcagatgggtgacactggtccgtgcggc
ccgtgcaccgaaatcttctacgatcacggcgaccacatttggggtggccctccgggaagt
ccggaagaagacggcgaccgctacattgagatctggaacatcgtcttcatgcagttcaac
cgccaggcagatggcacgatggaaccgctgccgaagccgtctgtagataccggtatgggt
ctggagcgtattgctgcggtgctgcaacacgttaactctaactatgacatcgacctgttc
cgcacgttgatccaggcggtagcgaaagtcactggcgcgaccgatctgagcaataaatcg
ctgcgcgtaatcgctgaccacattcgttcttgtgcgttcctgatcgcggatggcgtaatg
ccgtccaatgaaaaccgtggttatgtactgcgtcgtatcattcgtcgcgcagtgcgtcac
ggcaatatgctcggcgcgaaagaaaccttcttctacaaactggttggtccgctgatcgac
gttatgggctctgcgggtgaagacctgaaacgccagcaggcgcaggttgagcaggtgctg
aagactgaagaagagcagtttgcccgtactctggagcgcggtctggcgttgctggatgaa
gagctggcaaaactttctggtgatacgctggatggtgaaacggctttccgtctgtacgac
acctatggcttcccggttgacctgacggctgatgtttgtcgtgagcgcaacatcaaagtt
gacgaagctggttttgaagcagcaatggaagagcagcgtcgtcgcgcgcgcgaagccagc
ggctttggtgccgattacaacgcaatgatccgtgttgatagtgcatctgaatttaaaggc
tatgaccatctggaactgaacggcaaagtgaccgcgctgtttgttgatggtaaagcggtt
gatgccatcaatgccggccaggaagctgtggtcgtgctggatcaaacgccattctatgcg
gaatccggcggtcaggttggtgataaaggcgaactgaaaggcgctaacttctccttcgcg
gtggaagatacgcagaaatacggccaggcgattggtcacatcggtaaacttgctgcgggt
tctctgaaagtgggcgacgctgtgcaggctgatattgatgaggctcgtcgcgcccgtatt
cgtctgaatcactccgcaacgcacctgatgcacgctgcgctgcgccaggttctggggact
catgtatcgcagaaaggttcactggttaacgacaaggtgctgcgcttcgacttctcacac
aacgaagcgatgaaaccggaagagattcgtgcggtcgaagacctggtgaacgcacagatt
cgtcgcaatttgccgatcgaaaccaacatcatgaatctcgaagcggcgaaagcgaaaggt
gcgatggcgctgttcggcgagaagtatgatgagcgtgtacgcgtgctgagcatgggcgat
ttctccaccgagctgtgtggcggtactcacgccagccgcactggtgatattggtctgttc
cgcatcatctctgaatcgggtactgctgcaggcgttcgtcgtatcgaagcggtaaccgga
gaaggcgctatcaccaccgttcatgcagacagcgatcgcttaagcgaagtcgcgcatctg
ctgaaaggcgatagcaataatctggcggataaagtgcgctcagtactggaacgtacgcgt
cagttagaaaaagaactacaacagcttaaagaacaagctgccgcacaggagagcgcaaat
ctttccagtaaggcaattgatgttaatggtgttaagctgttggttagcgagcttagcggt
gttgagccgaaaatgttgcgtaccatggttgacgatttaaaaaatcagctggggtcgaca
attatcgtgctggcaacggtagccgaaggtaaggtttctctgattgcaggcgtatctaag
gacgtcacagatcgtgtgaaagcaggggaactgattggtatggtcgctcagcaggtgggc
ggcaagggtggtggacgtcctgacatggcgcaagccggtggtacggatgctgcggcctta
cctgcagcgttagccagtgtgaaaggctgggtcagcgcgaaattgcaataa
DBGET
integrated database retrieval system
