Shigella flexneri 301 (serotype 2a): SF2848
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Entry
SF2848 CDS
T00097
Symbol
lysA
Name
(RefSeq) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00300
Lysine biosynthesis
sfl00470
D-Amino acid metabolism
sfl01100
Metabolic pathways
sfl01110
Biosynthesis of secondary metabolites
sfl01120
Microbial metabolism in diverse environments
sfl01230
Biosynthesis of amino acids
Module
sfl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SF2848 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SF2848 (lysA)
Enzymes [BR:
sfl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SF2848 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
1025821
NCBI-ProteinID:
NP_708627
UniProt:
A0A0H2VXI6
A0AB36PJ44
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Position
complement(2937997..2939259)
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AA seq
420 aa
AA seq
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MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFEVVRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVN
AGSVDTLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR
HHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQGEEAVD
TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDA
GFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRA
LPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacattcactgttcagcaccgataccgatctcaccgccgaaaatctgctgcgtttg
cccgctgaatttggctgcccggtgtgggtctacgatgcgcaaattattcgtcggcagatt
gcagcgctgaaacagtttgaagtggtgcgctttgcacagaaagcctgttccaatattcat
attttgcgcttaatgcgtgagcagggcgtgaaagtggattccgtctcgttaggcgaaata
gagcgtgcgttggcggcgggttacaatccgcaaacgcaccccgatgatattgtttttacg
gcagatgttatcgatcaggcgacgcttgaacgcgtcagtgaattgcaaattccggtgaat
gcgggttctgttgatacgctcgaccaactgggccaggtttcgccagggcatcgggtatgg
ctgcgcgttaatccggggtttggtcacggacatagccaaaaaaccaataccggtggcgaa
aacagcaagcacggtatctggtacaccgatctgcccgccgcactggacgtgatacaacgt
catcatctgcagctagtcggcattcacatgcacattggttctggcgttgattatgcccat
ctggagcaggtgtgtggtgctatggtgcgtcaggttatcgaattcggtcaggatttacag
gctatttctgcgggcggtgggctttctattccttatcaacagggtgaagaggcggttgat
accgaacattattatggtctgtggaatgccgcgcgtgagcaaatcgctcgccatttgggc
caccctgtgaaactggaaattgaaccgggtcgcttcctggtagcgcagtctggcgtatta
attactcaggtgcggagcgtcaaacaaatgggtagccgccactttgtgctggttgatgcc
gggttcaacgatctgatgcgcccggcaatgtacggtagttaccaccatatcagtgccctg
gcagctgatggtcgttctctggaacacgcgccaacggtggaaaccgtcgtcgccgggccg
ttatgtgaatcgggcgatgtctttacccagcaggaagggggaaatgttgaaacccgcgcc
ttgccggaagtgaaggcaggtgattatctggtactgcatgatacaggggcatatggcgca
tcaatgtcatccaactacaatagccgtccgctgttaccagaagttctgtttgataatggt
caggcgcggttgattcgccgtcgccagaccatcgaagaattactggcgctggaattgctt
taa
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