Shigella flexneri 301 (serotype 2a): SF3108 Help Entry SF3108            CDS       T00097                                  Symbol rpoD Name (RefSeq) RNA polymerase sigma factor RpoD   KO K03086   RNA polymerase primary sigma factor Organism sfl  Shigella flexneri 301 (serotype 2a) Pathway sfl02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:sfl00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     SF3108 (rpoD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sfl03021]     SF3108 (rpoD) Transcription machinery [BR:sfl03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      SF3108 (rpoD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_ner Sigma70_r1_1 Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DNA_ligase_A_N TMPIT Motif Other DBs NCBI-GeneID:  1026692 NCBI-ProteinID:  NP_708877 UniProt:  A0A384KN81 A0AB36PHL4 LinkDB All DBs Position 3202084..3203925 Genome browser AA seq 613 aa AA seqDB search MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDLAPTATH VGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGR SHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKK NFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEEETGLTIEQVKD INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH PSRSEVLRSFLDD NT seq 1842 nt NT seq  +upstreamnt  +downstreamnt atggagcaaaacccgcagtcacagctgaaacttcttgtcacccgtggtaaggagcaaggc tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattcagatcag atcgaagacatcatccaaatgatcaacgacatgggcattcaggtgatggaagaagcaccg gatgccgatgatctgatgctggctgaaaacaccgcggacgaagatgctgccgaagccgcc gcgcaggtgctttccagcgtggaatctgaaatcgggcgcacgactgacccggtacgcatg tacatgcgtgaaatgggcaccgttgaactgttgacccgcgaaggcgaaattgacatcgct aagcgtattgaagacgggatcaaccaggttcaatgctccgttgctgaatatccggaagcg atcacctatctgctggaacagtacgatcgtgttgaagcagaagaagcgcgtctgtccgat ctgatcaccggctttgttgacccgaacgcagaagaagatctggcacctaccgccactcac gtcggttctgagctttcccaggaagatctggacgatgacgaagatgaagacgaagaagat ggcgatgacgacagcgccgatgatgacaacagcatcgacccggaactggctcgcgaaaaa tttgcggaactacgcgctcagtacgttgtaacgcgtgacaccatcaaagcgaaaggtcgc agtcacgctgccgctcaggaagagatcctgaaactgtctgaagtattcaaacagttccgc ctggtgccgaagcagtttgactacctggtcaacagcatgcgcgtcatgatggaccgcgtt cgtacgcaagaacgtctgatcatgaagctctgcgttgagcagtgcaaaatgccgaagaaa aacttcattaccctgtttaccggcaacgaaaccagcgatacctggttcaacgcggcaatt gcgatgaacaagccgtggtcggaaaaactgcacgatgtctctgaagaagtgcatcgcgcc ctgcaaaaactgcagcagattgaagaagaaaccggcctgaccatcgagcaggttaaagat atcaaccgtcgtatgtccatcggtgaagcgaaagcccgccgtgcgaagaaagagatggtt gaagcgaacttacgtctggttatttctatcgccaagaaatacaccaaccgtggcttgcag ttccttgacctgattcaggaaggtaacatcggcctgatgaaagcggttgataaattcgaa taccgccgtggttacaagttctccacctacgcaacctggtggatccgtcaggcgatcacc cgttctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgagactatc aacaaactcaaccgtatttctcgccagatgctgcaagagatgggccgtgaaccgacgccg gaagaactggctgaacgtatgctgatgccggaagacaagatccgcaaagtgctgaagatc gccaaagagccaatctccatggaaacgccgatcggtgatgatgaagattcgcatctgggg gatttcatcgaggataccaccctcgagctgccgctggattctgcgaccaccgaaagcctg cgtgcggcaacgcacgacgtgctggctggcctgaccgcgcgtgaagcaaaagttctgcgt atgcgtttcggtatcgatatgaacaccgaccacacgctggaagaagtgggtaaacagttc gacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgcaaactgcgtcac ccgagccgttctgaagtgttgcgtagcttcctggacgattaa

DBGET integrated database retrieval system