Shigella flexneri 301 (serotype 2a): SF3238
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Entry
SF3238 CDS
T00097
Symbol
yrbI
Name
(RefSeq) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00541
Biosynthesis of various nucleotide sugars
sfl01100
Metabolic pathways
sfl01250
Biosynthesis of nucleotide sugars
Module
sfl_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SF3238 (yrbI)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfl01005
]
SF3238 (yrbI)
Enzymes [BR:
sfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
SF3238 (yrbI)
Lipopolysaccharide biosynthesis proteins [BR:
sfl01005
]
Lipid A
SF3238 (yrbI)
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Paralog
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Motif
Pfam:
Hydrolase_3
Hydrolase
HAD_2
S6PP
Motif
Other DBs
NCBI-GeneID:
1027121
NCBI-ProteinID:
NP_708997
UniProt:
P67654
A0AB36PJ56
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All DBs
Position
3334441..3335007
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AA seq
188 aa
AA seq
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MSKAGASLATCYGPVSADVMAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY
GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV
AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL
DEAKGQSI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcaggtgcgtcgcttgcgacctgttacggccctgtcagcgccgacgttatg
gcaaaagcagagaacattcgtctgctgatcctcgacgttgatggcgtactgtcagatggc
ctgatttatatgggcaataacggcgaagagctgaaagcgttcaatgttcgtgacggttat
ggcattcgttgtgcgctcacctctgatattgaagtcgctatcattaccgggcgaaaggct
aaactggtagaagatcgttgtgccacattggggatcactcacttgtatcaggggcagtca
aacaaactgatcgcctttagcgatttgctggaaaaattggcgattgccccggaaaatgtg
gcttatgttggcgatgatctcatcgactggccggtaatggaaaaagtgggtttaagcgtc
gccgtggccgatgcgcatccactgttgatcccgcgcgccgattacgtgacgcgcattgct
ggcggtcgtggcgcagtgcgcgaagtttgcgacttattactcctggcgcagggcaaactg
gatgaagccaaagggcaatcgatatga
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