KEGG   Shigella flexneri 301 (serotype 2a): SF3315
Entry
SF3315            CDS       T00097                                 
Symbol
yrdD
Name
(RefSeq) DNA topoisomerase
  KO
K07479  putative DNA topoisomerase
Organism
sfl  Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:sfl00001]
 09190 Not Included in Pathway or Brite
  09192 Unclassified: genetic information processing
   99976 Replication and repair
    SF3315 (yrdD)
SSDB
Motif
Pfam: Zn_ribbon_Top1 DNA_ligase_ZBD Zn_Ribbon_1 DUF7340 Zn_Ribbon_TF CoiA_N Zn_ribbon_FGT1_2 Trm112p zf-UDP HMBD DUF5817 Zn_ribbon_InsA Zn_ribbon_RPB9 HVO_2753_ZBP
Other DBs
NCBI-GeneID: 1027035
NCBI-ProteinID: NP_709071
UniProt: A0A0H2V407
LinkDB
Position
complement(3414209..3414727)
AA seq 172 aa
MRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLEGQVCPVCG
ANLVLRQGRFGMFIGCSNYPECEHTELIDKPDETAITCPQCRTGHLVQRRSRYGKTFHSC
DRYPECQFAINFKPIAGECPECHYPLLIEKKTAQGVKHFCASKQCGKPVSAE
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgcgtaataatgagtcctgcccaaagtgcggggctgaactggttattcgatccgggaaa
cacggtccgtttcttggatgctcacagtatccggcgtgtgactacgtccgtcctctgaaa
tcttcagcggatggacatattgtcaaagttctggaggggcaggtttgccccgtatgtggc
gcaaatctggtattacgccagggacgctttggtatgtttattggttgcagtaactaccct
gaatgcgaacataccgaacttatcgataaaccggacgaaacagcaattacatgcccccaa
tgtcggacgggccatctggtccagcgccgctcccgttatggcaaaacatttcactcctgt
gatcgctacccggagtgtcaatttgccattaacttcaaaccaatagctggagaatgccct
gagtgtcattatccgctactcatcgaaaagaaaaccgcgcagggtgtaaaacacttttgt
gccagtaaacaatgtggaaagccggtttcggcggaataa

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