Shigella flexneri 301 (serotype 2a): SF3689
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Entry
SF3689 CDS
T00097
Symbol
rpoZ
Name
(RefSeq) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SF3689 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfl03021
]
SF3689 (rpoZ)
03400 DNA repair and recombination proteins [BR:
sfl03400
]
SF3689 (rpoZ)
Enzymes [BR:
sfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SF3689 (rpoZ)
Transcription machinery [BR:
sfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SF3689 (rpoZ)
DNA repair and recombination proteins [BR:
sfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SF3689 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-GeneID:
1024175
NCBI-ProteinID:
NP_709429
UniProt:
Q83PM8
A0AB36PJ88
LinkDB
All DBs
Position
3792421..3792696
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN
NQILDVRERQEQQELEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
ctggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccg
gaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaac
aaccagatcctcgacgttcgcgaacgccaggaacagcaagagctggaagccgctgaatta
caagccgttaccgctattgctgaaggtcgtcgttaa
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