Shigella flexneri 301 (serotype 2a): SF4013
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Entry
SF4013 CDS
T00097
Symbol
priA
Name
(RefSeq) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SF4013 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfl03400
]
SF4013 (priA)
Enzymes [BR:
sfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SF4013 (priA)
DNA repair and recombination proteins [BR:
sfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SF4013 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
1025783
NCBI-ProteinID:
NP_709739
UniProt:
A0A2S4N2Q9
A0AB36PK65
LinkDB
All DBs
Position
complement(4139689..4141887)
Genome browser
AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLTEL
KAVVEVLDGEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET
PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQANNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPLFPDVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI
LSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgcccacgttgccttgcccgttccgcttcctcgtacctttgactatctgctg
ccagaaggcatgacggttaaagctgggtgtcgcgtgcgcgtgccgtttggcaaacagcag
gagcgcatcgggattgtggtatcagttagcgatgccagcgaactgccgctcactgagcta
aaagcggtagtcgaagtgctggatggtgagccggtgtttactcactccgtctggcgattg
ctgctatgggcggcagattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactacgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggtcaggcggtggatctgaacagcctgaaacgctcacccaagcaacaacag
gcgctggcagcgttacggcaaggcaaaatctggcgcgaccaggttgccacgctcgaattt
aatgatgccgcgttgcaggcgctgcgcaaaaaaggtctgtgtgatttagcaagtgaaaca
ccagagtttagcgactggcgaacgaactatgccgtttctggtgagcggttgcgattgaat
accgaacaggccaccgccgttggcgcaattcatagcgcggcagatactttttctgcctgg
ctgctggcgggcgttaccggttccggtaaaacggaggtttatctcagtgtactggaaaac
gtgctcgctcagggcaaacaggcgctggtgatggtgccggaaatcggcctgacaccgcaa
actatcgcccgttttcgtgaacggtttaatgcgcccgtggaagttctgcattccggtctg
aacgacagcgagcgtctttcggcgtggctgaaagcgaaaaatggcgaggcggcgattgtg
atcggcacccgctccgcgctgtttacgccgtttaaaaatctcggcgtgattgtcattgac
gaagagcacgacagttcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtgtatcgtgcgcatagcgagcaaatcccgattattcttggctccgcaacgcccgcg
ctggaaacgttgtgcaacgtccagcagaaaaaataccgcctgctgcgcctgacgcgccgg
gcggggaatgcgcgtccggcaattcaacacgtgctggatttaaaaggtcagaaggtgcag
gcaggtctggctccggcgttaatcacccgtatgcgccagcatttacaggccaacaatcag
gttatcctctttcttaaccgccgtggctttgcgcctgcgctactgtgccacgactgcggc
tggattgccgaatgcccacgttgcgatcactactacacgctgcatcaggcgcaacagcat
ttgcgctgtcaccactgtgacagtcagcgtccggtgccgcgccagtgcccttcctgcggt
tccacgcacctggtacccgtggggctgggcaccgaacagcttgaacagacgcttgcgccg
ctgttccctgatgtgcccatttctcgtatcgaccgcgataccaccagccgcaaaggggcg
ctggaacagcaactggcggaagtacatcgcggcggtgcgaggattttgatcggcacacaa
atgctggcgaaaggtcaccactttccggatgtgacgctggtggcgttactggatgtggac
ggcgcgctgttttctgccgattttcgctcggcagagcgtttcgctcagctttacacccag
gtcgctggtcgtgccgggcgtgcgggtaaacaaggcgaagtggtgctgcaaacgcaccat
ccggaacatcctctgttgcaaacgttgctctataaaggctacgacgcctttgccgaacag
gcgctggctgagcgacggatgatgcaactgccgccatggaccagccatgtgattgtgcgt
gcggaagatcataacaatcagcatgcgccgctgttcctgcaacaactgcgtaatctgatc
ctctccagcccgctggcagacgacaaactgtgggttctcggtccggttccggcactggca
cctaaacgtggcggtcgctggcgctggcagatattgttgcagcacccttcccgcgtgcgc
ttgcaacacatcattagtggtacgctggcgctcatcaatacaataccggattcccgcaag
gtgaaatgggtactggatgttgatccgattgagggttaa
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