Shigella flexneri 301 (serotype 2a): SF4047
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Entry
SF4047 CDS
T00097
Symbol
trmA
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfl03016
]
SF4047 (trmA)
Enzymes [BR:
sfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
SF4047 (trmA)
Transfer RNA biogenesis [BR:
sfl03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
SF4047 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Cons_hypoth95
Methyltransf_4
Methyltransf_15
MTS
Methyltransf_11
Methyltransf_31
PrmA
Methyltransf_12
TRM5-TYW2_MTfase
DUF3164
Ins134_P3_kin_N
Motif
Other DBs
NCBI-GeneID:
1027600
NCBI-ProteinID:
NP_709769
UniProt:
Q820Z9
A0AB36PLT3
LinkDB
All DBs
Position
complement(4182181..4183281)
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AA seq
366 aa
AA seq
DB search
MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLY
HIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLRHKLFQIDYLTTLSNQAVV
SLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTKIALDQDYIDERLPVAGKEMI
YRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEI
AKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQFETIFVDP
PRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECG
VLLTAK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaacaccttccaacagaacagtatgaagcgcagttagccgaaaaagtggta
cgtttgcaaagtatgatggcaccgttttctgacctggttccggaagtgtttcgctcgccg
gtcagtcattaccggatgcgcgcggagttccgcatctggcacgatggcgatgacctgtat
cacatcattttcgatcaacaaaccaaaagccgcatccgcgtggatagcttccccgccgcc
agtgaactcatcaaccagttgatgacggcgatgattgcgggtgtgcgtaataatcccgtt
ctgcgccacaagttgttccagattgattacctcaccacgctgagtaatcaggcggtggtt
tccctgctgtaccataaaaagctggatgatgagtggcgtcaggaagcggaagcactgcgc
gatgcactgcgcgcgcagaatctgaatgtgcatctgattggtcgggcaacgaaaaccaaa
atcgcgctggatcaagattacatcgacgagcgtctgccggtcgcagggaaagagatgatc
tatcgtcaggtagaaaacagctttacccagccgaacgcggcgatgaatattcagatgctg
gaatgggcgctggacgtaaccaaaggctcaaaaggcgatttactggagctgtactgcggc
aacggtaacttttcattagcgctggcgcgcaattttgatcgggtattagccaccgaaatc
gccaaaccgtcagtcgctgccgcgcaatacaacattgccgctaaccatattgataacgta
caaattattcgtatggcggcagaagaatttactcaggcgatgaatggtgtgcgcgagttt
aaccgcctgcaagggatcgacttaaagagctatcagttcgaaaccatttttgtcgaccca
ccgcgcagcggtctggacagtgaaaccgagaaaatggtgcaggcgtatccacgtattctg
tatatctcctgcaatccggaaacgttatgcaaaaatctggaaacattaagccagacgcac
aaggtcgaacgtctggctctgtttgatcagttcccctacacgcaccatatggagtgcggc
gtattactgaccgcgaagtaa
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