Shigella flexneri 301 (serotype 2a): SF4226
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Entry
SF4226 CDS
T00097
Symbol
yjgR
Name
(RefSeq) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfl03400
]
SF4226 (yjgR)
DNA repair and recombination proteins [BR:
sfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SF4226 (yjgR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
TrwB_AAD_bind
ResIII
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_16
AAA_30
T2SSE
AAA
AAA_7
AAA_19
nSTAND_NTPase5
CbiA
SRP54
AAA_25
AAA_28
NTPase_1
nSTAND3
AAA_18
AAA_6
Hydrolase
P-loop_TraG
TraG-D_C
Motif
Other DBs
NCBI-GeneID:
1025405
NCBI-ProteinID:
NP_709938
UniProt:
A0A0H2V3J3
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All DBs
Position
4397527..4399077
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AA seq
516 aa
AA seq
DB search
MHSRCLYSRQETGGNLMSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLA
ESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFGEK
GHTVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDN
AKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILS
AEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIE
QVIRLIRSKGVGVWFVSQNPSDIPDNVFGQLGNRVQHALRAFTPKDQKAVKTAAQTMRAN
PAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPV
YGKYEDEVDRESAYEMLQKGFQASTEQQNNPPVKGKEVAVDDGILGGLKDILFGTTGPRG
GKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRKR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgcacagccgttgcctatactccaggcaggaaactggaggaaatctcatgagcgaaccc
ctgttaattgcccgcacgccggacacagaactgtttttactgccgggaatggctaaccgt
cacgggctgattactggcgcaacggggacgggtaaaaccgttacgctgcaaaaactggca
gagtcattgtcggaaatcggcgtgccggtgtttatggctgatgtgaaaggcgatctgacc
ggtatcgcgcaggcaggaacggcgtcggaaaaactgctcacaaggcttaaaaatatcggc
gtcaatgactggcaaccgcatgccaatccggtggtggtgtgggatatctttggcgagaaa
ggccacacggtgcgggcgacggtttcggatctggggccgctgttgctggcgcgactgttg
aatctcaacgatgtgcaatctggcgtgctgaatattatcttccgcattgcggacgatcag
ggattgttgctgctcgactttaaagatttgcgggcgattacccagtacatcggcgataac
gccaaatccttccagaatcagtacggaaatatcagtagcgcatcggttggtgccatccag
cgcggattactgtcgctggaacagcaaggcgcagcacacttctttggtgagccgatgctg
gatatcaaagactggatgcgcaccgatgccaacggtaaaggcgttatcaatatcctcagc
gccgagaaactttatcagatgccgaaactgtacgccgccagcctgctgtggatgctttca
gagttgtatgaacaattgccggaagcgggcgatctggagaaaccaaaactggtgtttttc
ttcgacgaggcacatctgctgtttaacgatgcaccgcaggtactgctggataagattgag
caggtgataaggcttattcgctcaaaaggcgtgggcgtctggttcgtttcgcaaaacccg
tctgatattccggataatgtgttcggccagctcggtaatcgtgttcagcacgctttgcgg
gcttttacgccaaaagatcagaaagcagtgaagacagcggcgcaaaccatgcgggccaat
ccggcatttgataccgaaaaggcaatccaggaactggggaccggcgaggcgttaatctcg
tttctcgatgcaaaaggaagtccttctgtggtggaacgggcgatggtgatcgcaccttgt
tcgcgaatggggccggtgacggaagatgagcgtaatggcctgattaatcactccccggtg
tatggcaaatatgaagatgaggtggaccgcgagtccgcctatgagatgctgcaaaaaggc
tttcaggccagtaccgagcagcaaaataatccccccgtgaaagggaaagaggtggcggtg
gatgacggtattcttggtggattgaaggatattttgtttggcactaccggaccacgcggc
gggaagaaagatggtgtggtgcaaacaatggcgaaaagcgccgctcgccaggtgacgaat
cagattgtacgcgggatgttggggagtttgctgggggggagaaaaagataa
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