Shigella flexneri 301 (serotype 2a): SF4230
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Entry
SF4230 CDS
T00097
Symbol
holC
Name
(RefSeq) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl03030
DNA replication
sfl03430
Mismatch repair
sfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SF4230 (holC)
03430 Mismatch repair
SF4230 (holC)
03440 Homologous recombination
SF4230 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfl03032
]
SF4230 (holC)
03400 DNA repair and recombination proteins [BR:
sfl03400
]
SF4230 (holC)
Enzymes [BR:
sfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SF4230 (holC)
DNA replication proteins [BR:
sfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SF4230 (holC)
DNA repair and recombination proteins [BR:
sfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SF4230 (holC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
PBP1c_linker_2
Motif
Other DBs
NCBI-GeneID:
1027003
NCBI-ProteinID:
NP_709942
UniProt:
A0A0H2V5E6
LinkDB
All DBs
Position
4403290..4403733
Genome browser
AA seq
147 aa
AA seq
DB search
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP
AESFVPHNLAGEGPRGSAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYE
DSLKQLARERYKAYRVAGFNLNTATWK
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgcaacgttctaccttctggacaatgacaccaccgtcgatggcttaagcgcc
gttgagcaactggtgtgtgaaattgccgcagaacgttggcgcagcggtaagcgcgtactc
atcgcctgtgaagatgaaaagcaggcttaccggctggatgaagccctgtgggcgcgtccg
gcagaaagctttgttccgcataatttagcgggagaaggaccgcgcggcagtgcgccggtg
gagatcgcctggccgcaaaaacgcagcagcagcccgcgcgatatattgattagtctgcga
acaagctttgcagattttgccaccgctttcacagaagtggtagacttcgttccttatgaa
gattctctgaaacaactggcgcgcgaacgctataaagcctaccgcgtggctggtttcaac
ctgaatacggcaacctggaaataa
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