Shigella flexneri 301 (serotype 2a): SF4249
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Entry
SF4249 CDS
T00097
Symbol
treR
Name
(RefSeq) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfl03000
]
SF4249 (treR)
Transcription factors [BR:
sfl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SF4249 (treR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_3
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_28
HTH_Crp_2
HTH_26
CENP-B_N
MarR
TrmB
HHH
Peripla_BP_4
HTH_17
HTH_38
HTH_AraC
Motif
Other DBs
NCBI-GeneID:
1023352
NCBI-ProteinID:
NP_709960
UniProt:
A0A2S4N3C4
A0AB36P929
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All DBs
Position
4419871..4420818
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMENQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT
GRSEPQQIIIPATLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccatcaaagacatcgcgcgcttaagcggcgtggggaaatctacg
gtttcccgggtgctgaataacgaaagcggcgtgagtcagcgcacgcgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgctctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgtctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagcgttctatgaacaaggttacgatccaatcatgatggaaaat
cagttttccccacaattagttgccgaacatttgggggtgctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttaccggcataaccgaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaagattctgatgcaacggctctatgaccaggggcatcgcaatatcagttat
ctcggcgtgccgcatagtgacgtgacgaccgggaagcgacgtcacgaagcctacctggcg
ttctgcaaagcgcataaactgcatcccgttgccgctctgccagggcttgctatgaagcaa
ggctatgaaaacgtagcaaaagtgattacgcctgaaactaccgcgttactgtgcgcaacc
gacacgctggctcttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtaggtaatacgccgttaatgaaattccttcatccggagatcgtcaccgta
gatcctggctacgccgaagctggacgccaggcggcctgccaattgatcgcacaggtaacc
gggcgcagcgaaccgcaacaaatcatcatccccgccaccctgtcctga
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