Shigella flexneri 301 (serotype 2a): SF4297
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Entry
SF4297 CDS
T00097
Symbol
groEL
Name
(RefSeq) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SF4297 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfl03019
]
SF4297 (groEL)
03110 Chaperones and folding catalysts [BR:
sfl03110
]
SF4297 (groEL)
03029 Mitochondrial biogenesis [BR:
sfl03029
]
SF4297 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfl04147
]
SF4297 (groEL)
Enzymes [BR:
sfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SF4297 (groEL)
Messenger RNA biogenesis [BR:
sfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SF4297 (groEL)
Chaperones and folding catalysts [BR:
sfl03110
]
Heat shock proteins
HSP60 / Chaperonin
SF4297 (groEL)
Mitochondrial biogenesis [BR:
sfl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SF4297 (groEL)
Exosome [BR:
sfl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SF4297 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SF4297 (groEL)
Exosomal proteins of breast cancer cells
SF4297 (groEL)
Exosomal proteins of colorectal cancer cells
SF4297 (groEL)
Exosomal proteins of bladder cancer cells
SF4297 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
1025527
NCBI-ProteinID:
NP_710008
UniProt:
P0A6F8
A0AB36PAR1
LinkDB
All DBs
Position
4474644..4476290
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagttaccctcggtccaaaaggccgtaacgtagttctg
gataaatctttcggtgcaccgaccatcaccaaagatggtgtttccgttgctcgtgaaatc
gaactggaagacaagttcgaaaatatgggtgcgcagatggtgaaagaagttgcctccaaa
gcgaacgacgctgcaggcgacggtaccaccactgcaaccgtactggctcaggctatcatc
actgaaggtctgaaagctgttgctgcgggcatgaacccgatggacctgaaacgtggtatc
gacaaagcggttaccgctgcagttgaagaactgaaagcgctgtccgtaccgtgctctgat
tctaaagcgattgctcaggttggtaccatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggacaaagtcggtaaagaaggcgttatcaccgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgctggctgacaagaaaatctccaacatccgcgaaatgctgccggttctggaagctgtt
gccaaagcaggcaaaccgctgctgatcatcgctgaagatgttgaaggcgaagcgctagca
actctggttgttaacaccatgcgtggcatcgtgaaagttgctgcggttaaagctccgggc
ttcggcgatcgtcgtaaagctatgctgcaggatatcgcaaccctgactggcggtaccgta
atctctgaagagatcggtatggagctggaaaaagcaaccctggaagacctgggtcaggct
aaacgtgttgtgatcaacaaagacaccaccactatcatcgatggcgtgggtgaagaagct
gcaatccagggccgtgttgctcagatccgtcagcagattgaagaagcaacttctgactac
gaccgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgcagttatcaaa
gtaggtgctgctaccgaagttgaaatgaaagagaaaaaagcacgcgttgaagatgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgctggtggtggtgttgcgctgatc
cgcgtagcgtctaaactggctgacctgcgtggtcagaacgaagaccagaacgtgggtatc
aaagttgcactgcgtgcaatggaagctccgctgcgtcagatcgtcctgaactgcggcgaa
gaaccgtctgttgttgctaacaccgttaaaggcggcgacggcaactacggttacaacgca
gcaaccgaagaatacggcaacatgatcgacatgggtatcctggacccaaccaaagtaacc
cgttctgctctgcagtacgcagcttctgtggctggcctgatgatcaccaccgaatgcatg
gttaccgacctgccgaaaaacgatgcagctgacttaggcgctgctggcggtatgggcggc
atgggtggcatgggcggcatgatgtaa
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