Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00013
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Entry
SPHFLASMR4Y_00013 CDS
T04949
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPHFLASMR4Y_00013 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfla01007
]
SPHFLASMR4Y_00013 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfla03016
]
SPHFLASMR4Y_00013 (cysS)
Enzymes [BR:
sfla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
SPHFLASMR4Y_00013 (cysS)
Amino acid related enzymes [BR:
sfla01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SPHFLASMR4Y_00013 (cysS)
Transfer RNA biogenesis [BR:
sfla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SPHFLASMR4Y_00013 (cysS)
Prokaryotic type
SPHFLASMR4Y_00013 (cysS)
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
ARMH3_C
Motif
Other DBs
NCBI-ProteinID:
ASK86807
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All DBs
Position
complement(16862..18313)
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AA seq
483 aa
AA seq
DB search
MNDTAAHPLKLFNSLTRQMEEFVPVHPGEARVYTCGPTVYNYPHIGNMRAYVFADLLGRT
LSWKGYRLTHVINITDVGHLTDDADEGEDKLEKMAAEKAQSIWDIAKHYTEAYWQDIKAL
NIRQPAHWSIATDYVPAMIDYAKGIADKHCYELESGLYFDVSTVTNYGTLARASTDDGEG
RIDTVEGKRNAADFAIWRKTPPGEKRQMEWDSPWGKGAPGWHLECSVMSEALLGLPFDIH
TGGIDHREIHHPNEIAQNQAHSCSDHSGAKIWMHNNFLIDRTGKMSKSSGDFLRVQLLID
KGFHPLAYRLMCLQAHYRSELEFSWDNLVAALTRLKRIVMGVERLREKADGQTVAINHPA
LVQLRDKFDAALSEDLNSSKGLPLLEEMLSLKKLPAGQRLALLTEMDSVMGLQLTSLTRD
QLRVRPAGAQLDESDIEAKLDQRQQAKAAKDFAAADAIRDELTAQGVELMDGDPLRWDWK
MEL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacactgccgcccatccgctgaaactgttcaacagcctgactcgccagatggaa
gagttcgtgcctgtccacccgggcgaagcgcgcgtctacacttgcgggccgaccgtctat
aactatccccatatcggcaatatgcgggcctatgtttttgccgatctgctggggcggacg
cttagctggaagggctacaggctcacccatgtcatcaatatcaccgatgtcggccatctg
accgacgacgccgacgaaggcgaagacaagctggagaaaatggcggcggaaaaagcccag
tcgatctgggatatcgcgaaacattataccgaggcctattggcaggatatcaaggcactc
aatatccgccagccggcccactggtcgattgccaccgactatgtcccggcgatgatcgac
tatgcaaaaggcatcgccgacaagcattgctacgaactggaaagcggcctctatttcgac
gtgtcgaccgtgacaaattacggcacgctggctcgtgcatcgaccgatgacggcgaaggc
cggatcgacacggtcgagggcaagcgcaacgccgccgatttcgcgatctggcgcaagaca
cccccgggcgagaaacgacagatggaatgggacagcccctggggcaagggcgcgccgggc
tggcatctggaatgttcggtgatgtcggaagcgctgctcggcctgccgttcgatatccat
accggcggcatcgaccatcgcgagattcaccatcccaacgagattgcgcagaaccaggcg
catagctgctccgaccacagcggcgcgaaaatctggatgcacaataatttcctgatcgac
cggaccggcaagatgtccaagtcttcgggcgattttctgcgggtgcaactgctgatcgac
aagggtttccaccccctcgcctatcgcctgatgtgcctgcaggcccattatcgcagcgag
ctggaattcagctgggacaatctggtcgcggcgctgacccggctgaagcggatcgtcatg
ggcgtcgagcggctgcgggagaaagcggacggacagacagtagcgatcaaccatccggca
ctcgtccaattgcgcgacaagtttgacgccgctctcagcgaagacctgaacagttcgaaa
ggcctgccgctgctcgaggaaatgctttcactcaagaagctgccggccggacaaagactc
gcgctgctgaccgaaatggactccgtgatgggactgcaactgaccagcctgacacgcgat
cagttgcgggtgcggcctgccggggcgcaactggacgaaagcgatatcgaggcaaagctc
gaccagcgccagcaggcaaaggcggcaaaggatttcgccgctgccgatgcgatccgtgac
gaactcaccgcgcaaggcgtggagctgatggatggcgacccgctgcgctgggactggaaa
atggagctgtag
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