Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00187
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Entry
SPHFLASMR4Y_00187 CDS
T04949
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_00187 (radA)
DNA repair and recombination proteins [BR:
sfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPHFLASMR4Y_00187 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA
AAA_16
AAA_22
NTPase_1
AAA_30
RecA
MeaB
AAA_5
nSTAND3
Glyco_hydro2_C5
CbiA
DUF7125
SLFN-g3_helicase
DUF7129
NACHT
Motif
Other DBs
NCBI-ProteinID:
ASK86980
UniProt:
A0A220W2E5
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All DBs
Position
208522..209886
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AA seq
454 aa
AA seq
DB search
MAKPKKKYVCQNCGSIAHRWEGQCGDCGEWNTLVEEAGETVFASKHNLQSGGREVRLVGL
DSEIALPDRKKTGIAEFDRAVGGGLVTGSATLMGGDPGIGKSTLLLQVSARLAEAGLSVA
YISGEEAADQVRLRARRLGLGKAPVKLASATSVRDILTTLGRDAPDFVVIDSIQTMHSDL
IEGAPGTVSQVRASAQEIIKFAKEHGTMVMLVGHVTKDGNIAGPRVLEHMVDTVMSFEGE
RSHQYRILRSIKNRFGGTDEIGVFAMEEKGLTEVVNPSALFLTDRSEEVTGATVFPAMEG
TRPVLVEIQALTVRLASGATPRRSVVGWDSSRLAMILAVLEARCGLSFSGAEVYLNVAGG
YRLTDPAADLAVAAALISAHAERPMPSDAVIFGEIALSGEIRPVSRTPLRLKEASKLGFD
RALIPASGEKSSDAMKKLQFAKLANLVDHMLDRD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccaaagaaaaaatatgtctgtcagaattgcggctcgatcgcgcatcgctgg
gaagggcaatgcggcgattgtggcgagtggaatacgctggtcgaagaagcgggcgaaacc
gtgttcgcgtcgaagcataatctgcaaagcggcgggcgtgaggtgcggctggtcgggctg
gacagcgaaattgcgctgcccgaccgtaaaaagaccggtatcgccgaattcgaccgcgct
gtcggcggcggactggtgaccggttctgccacgttgatgggcggcgatccggggattggc
aaatcgacgcttttgttacaggtttctgcacgactggccgaagcaggactgtcggttgcc
tatatttcgggcgaggaagcggcggatcaggtgcgtctgcgggcgcgacgactggggctg
ggcaaagcgccggtcaagttggcttcggcaacctctgttcgcgacatattgacgaccctc
ggccgcgatgcgcccgattttgtcgtgatcgattcgatccagacgatgcacagcgatctg
atcgagggcgccccgggaacagtaagccaggtgcgggcctcggcacaggaaatcatcaag
tttgccaaggaacatggcacgatggtcatgctggttggccatgtcaccaaggatggcaat
atcgccggcccgcgcgtgctcgaacatatggtcgacacggtgatgagcttcgaaggggag
cgcagccatcaatatcgcatccttcgctcgatcaagaaccgctttggcggcaccgacgaa
atcggcgttttcgcgatggaagaaaaaggcctcaccgaagtggtcaatccctcagctctg
ttcctgactgaccgcagcgaagaagtcaccggagcgacggtattcccggcgatggagggc
acccgtcccgtactggtcgagatccaggcgctgactgttcggttggcgagtggcgcaacc
ccacggcgttcggtggtcggatgggacagttcgcggctggcgatgatcttggcggtgctg
gaagcgcgctgcgggctcagcttctcaggcgcggaggtctatctcaatgtcgccggcggc
tatcggctcaccgaccctgccgctgatctggcggttgctgcggcgttgatctccgcccat
gccgaacggcccatgcccagtgacgccgtgatattcggcgaaattgcgctgtccggagaa
atccggccggtttcacgaacacctctgcgcctgaaagaagcatccaagctcggttttgat
cgcgcgctcatcccggcttccggcgaaaaaagcagcgacgcgatgaagaaattgcaattt
gcgaaactcgccaatctcgttgaccatatgctcgaccgtgactag
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