Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00324
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Entry
SPHFLASMR4Y_00324 CDS
T04949
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfla03000
]
SPHFLASMR4Y_00324
Transcription factors [BR:
sfla03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SPHFLASMR4Y_00324
SSDB
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Paralog
GFIT
Motif
Pfam:
FCD
Motif
Other DBs
NCBI-ProteinID:
ASK87116
LinkDB
All DBs
Position
343397..343969
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AA seq
190 aa
AA seq
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MRIDVGRGFRVAPVSVEDLEDVTSWRIEFETRALDASIGNGDDNWEAEIIASYHLLSKIK
VPRVDAPAEEMYDYGEKHMRFHDALVAACGSPWLMFFRSALQTQALRYQALAMTDREHMV
NRAVDEHQAIKNAAVARDTKQAMALVTHHIQQTSDDVKVLLQTSGKLDEFLPGPVAEEKP
RRRGRPRNTA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcattgatgtcgggcgcgggttcagggtggctccagtttcagtcgaagatcttgaa
gatgtcacatcttggagaattgaattcgaaacgcgagcactcgacgcttcgattggcaac
ggcgatgataactgggaagcagaaatcattgcttcctatcacctgttgagcaagattaag
gtgccgcgcgtagatgctcccgcggaagaaatgtacgactacggcgagaaacatatgcgc
tttcacgacgctctggtcgctgcctgcggatcgccatggttgatgtttttccgctctgcg
ctgcagactcaggccttgcgctatcaggcgctcgccatgacagaccgggagcacatggtg
aaccgggccgtggacgagcatcaagcaatcaagaatgctgcggtagcacgcgatacaaag
caggcgatggcactggttacgcatcatatacagcagacatcagacgatgtgaaagttctg
ctgcagacttccggcaagctggacgagtttctaccgggaccagtcgccgaggaaaagccg
cgccgcagaggacgtccacgcaacactgcctga
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