KEGG   Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00385
Entry
SPHFLASMR4Y_00385 CDS       T04949                                 
Name
(GenBank) F plasmid transfer operon protein
  KO
K12057  conjugal transfer pilus assembly protein TraF
Organism
sfla  Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:sfla00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sfla02044]
    SPHFLASMR4Y_00385
Secretion system [BR:sfla02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   SPHFLASMR4Y_00385
SSDB
Motif
Pfam: TraF Thioredoxin Thioredoxin_2 DUF7625 Macscav_rec
Other DBs
NCBI-ProteinID: ASK87175
UniProt: A0A220W2Y4
LinkDB
Position
complement(413547..414422)
AA seq 291 aa
MKNNLARRFPLPLALGGLAVLVLAIVFLIDAAISPAFAQGATSNPIDPPTNTARTSADEL
YCEKRRLGYWFYCTKPKPPEMEALPPEPQTSASEKLDAVTKELRELKAKAILEPTRENVI
AYIRFQREQLDRASLFSDVWQRAIWQQPDLDYTLERPVSTLAKRQWQDARSASRDTVMAN
LGKRYGLFYFFAQSCGACEVMSPIVKSVSGRWKLTVRAISTDGGPSKHFQNYTVETGQRV
RMGLKPKITPALVLWDSAQSRAIPIGYGIISADELQDRIYLLTSKEAGHDY
NT seq 876 nt   +upstreamnt  +downstreamnt
atgaagaacaacttagcccgaaggtttcccctgcccttagcgctcggcggcttggccgtg
cttgtccttgcaatcgtgtttcttattgacgccgccatcagtccggcatttgcgcaaggc
gcaacatccaatccaattgacccaccaaccaataccgcgcgaaccagcgcggatgaactc
tactgcgagaagcgccggctaggctactggttctattgcaccaaaccaaagccgcctgaa
atggaagcgctgccgccagaaccacagacaagcgcaagcgagaaactcgatgcggtcacg
aaggaattgcgcgagcttaaagccaaagccattctcgaaccaacccgcgagaatgttatc
gcttatatacgcttccaacgcgaacagctcgaccgcgcgtcgctgttttcggacgtttgg
cagcgcgcgatctggcagcaacccgatctggattacacgctcgagcgcccggtttccacg
ctggccaaaagacagtggcaagatgcgcgaagcgcttcgcgtgataccgtcatggccaat
ctggggaaacgctacgggctgttttacttttttgctcagagctgcggagcctgtgaggtc
atgtcgccaatcgtaaaatcagtatcgggtcgctggaaactgacggtccgcgccatctca
accgatggcggaccatcgaagcatttccaaaattacaccgtcgagaccgggcaacgcgtg
cgcatgggattgaagcctaaaattacccctgccctggtgctttgggatagcgcgcaaagc
cgggccatcccgattggctacggcatcatctcagcggatgaactgcaggaccgtatttat
ttgctcacatcaaaggaagccggacatgattattaa

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