Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00593
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Entry
SPHFLASMR4Y_00593 CDS
T04949
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfla03016
]
SPHFLASMR4Y_00593 (truB)
Enzymes [BR:
sfla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SPHFLASMR4Y_00593 (truB)
Transfer RNA biogenesis [BR:
sfla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPHFLASMR4Y_00593 (truB)
Prokaryotic type
SPHFLASMR4Y_00593 (truB)
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ASK87378
UniProt:
A0A220W3I4
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All DBs
Position
619517..620497
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AA seq
326 aa
AA seq
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MRTAKPHGWIILDKPLELGSTQAVGAVKRNLREAGLLGKGKNKLKVGHGGTLDPLATGVL
PIALGEATKLCGRMLDASKIYEFTIGFGAETETLDIEGEVTEISSHRPTLAEIEAILPQF
TGPIEQIPPKYSALKIDGKRAYDLARAGVDVEMKLRAVEIYSLAVCHPEPVSGSPGGLKQ
VQDDEPVEKITLSATVSKGTYIRSFARDIARALGTVGHVTMLRRTKAGPFSLKQAISLDK
LNEIGKGADIKEYLLPLEAGLDDIPAFDLDPDQARMLRQGLTLDEQDLVGNPAVNGLFLA
TENEGSPVALAEIVDGTVKVVRGFNM
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ttgaggacagcaaagccgcacggctggatcatattggacaagccgctcgaactcggctcg
acgcaagccgtcggggcggtgaagcgcaatctgcgcgaagccggtttgctcggcaagggc
aagaacaagctgaaggtcggtcatggggggacgctggacccgctggcgactggcgtcctg
ccgattgcactgggcgaggctacgaaattgtgcgggcggatgctcgatgcgtccaagata
tacgaattcaccattggttttggcgccgagaccgagacgctcgatatcgaaggggaagtg
acggagatatcttcccatcggccaacgctcgcggaaattgaggcgattctgccccaattt
accgggccgatcgagcagatacctccaaaatattctgcgctgaagattgatggcaagcgg
gcctatgatctggcgcgggcaggggtggatgtcgaaatgaagctgcgggcggtggagata
tattccctggcagtttgtcatcctgaacctgtttcaggatctccggggggcctgaaacag
gttcaggatgacgagccagtggaaaaaatcaccctttcggccacagtctccaagggcacc
tacattcgttcgttcgcccgcgatatcgcccgggcgctgggcacggtcggccatgtcacc
atgctgcgccggacaaaggcggggccatttagcctgaagcaggcgatttcgctggacaaa
ctcaacgaaattggtaagggcgcggacatcaaggaatacctcttgccgcttgaggcgggg
ctggacgacatcccggctttcgacctcgaccctgatcaggcaagaatgcttcgacaaggc
ttgacgctggacgagcaggatttggtcgggaaccccgcagtcaacgggctttttctagcg
acagagaatgaaggttctccggttgctctggcagagattgttgatggcaccgtaaaggtt
gtccgcgggttcaatatgtaa
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