Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00626
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Entry
SPHFLASMR4Y_00626 CDS
T04949
Symbol
fixJ
Name
(GenBank) DNA-binding response regulator
Organism
sfla
Sphingorhabdus sp. SMR4y
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_29
AAA_2
HTH_23
HTH_28
HTH_17
HTH_30
AAA_16
Xre-like-HTH
AAA_7
HTH_22
AAA_19
HTH_1
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
ASK87411
LinkDB
All DBs
Position
655608..656993
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AA seq
461 aa
AA seq
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MMPHREQPPKEKLLIVEDDPGLQKQLKWAYDDFEVIIAGDRETAIEKLRSEEPDVVTLDL
GLPPDPDGTTEGFATMEAILSLKPDTKVIVASGHGEKASALRAISGGAWDFYQKPVDIDE
LGLIVRRAFHVRNLEQENASLAAKSNGEGYILGGIITGAPEMLKVAQMVERVANTNASVM
LLGASGTGKELLARGLHDCSDRRDKAFVAINCAAIPENLLESELFGHEKGAFTGAIKTTE
GKIEQADGGTLFLDEVGDIPLPLQVKLLRFLQERVIERIGGRKAIAVDTRIVCATHQNLE
TMISTNDFREDLYYRLAEIVIKIPPLAERSGDASLLARHFQKKFAAEINPAVKGLAPDAL
AALEAWHWPGNVRELENRIKRAVIMADGKMVSAHDLDLDVDENAATDLLNLKAAREAADR
SAILRAISQTSGNISNAAKLLGISRPTLYDLLKQYKLQQAS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatgccacatagagagcaaccaccaaaagagaagctgctgatcgtcgaagacgatccg
ggtctgcagaaacagctgaaatgggcttatgacgatttcgaggtgattatcgctggcgat
cgcgaaaccgcgatcgagaagctgcgctcggaagagccggatgtcgtgacactcgacctt
ggtctgccgccggatccggatggcaccaccgaaggttttgcaacgatggaggcgatattg
agcctgaagcccgataccaaggtcattgttgcatccggccatggcgagaaagccagcgcg
ctgcgcgccatttccggcggtgcctgggacttttaccagaaaccggtggacattgacgag
ttgggcctgatcgtccgtcgggcttttcatgtccgcaatctggaacaggaaaatgccagc
ctggccgccaagagcaatggcgaaggttatatattgggcggcattatcacgggcgcgccg
gaaatgctgaaagtggctcaaatggtcgagcgcgtggccaataccaatgcgtcggtgatg
cttctgggcgccagcggaaccggcaaggagttgctggccagaggtctgcacgattgcagc
gaccggcgcgacaaggcctttgtcgcaatcaattgtgcggccattcccgaaaaccttctg
gaatccgaattgttcggccatgaaaagggtgcatttaccggggccatcaagacgaccgag
gggaagatcgaacaggcggatggcggcaccctgttcctcgatgaagttggcgatatccca
ttgccgctgcaggtcaaattgctgcgctttctccaggagcgggtgatcgagcggattggc
gggcgcaaggccatcgctgtcgacacgcggatcgtgtgtgcgacccaccagaatcttgaa
accatgatcagcaccaatgattttcgcgaggatctatattatcgcctggccgaaatcgtc
atcaagattccgcctcttgccgaacgatcaggggatgccagcctgcttgcccggcatttc
cagaagaaatttgctgccgagatcaatccggccgtcaaggggctggcgcccgacgctctg
gctgcgctggaagcctggcactggcccggcaatgtccgcgaactggaaaaccggatcaag
cgtgcggtgatcatggctgatggcaaaatggtcagcgcccatgatctcgacctggatgtc
gatgaaaatgccgcaactgatctgctgaacctgaaagcggcgcgcgaggcggccgaccga
tcggcgatcctgcgcgcgatttcccagaccagcggtaatatatccaatgctgccaaattg
ctcgggatcagccgtccgacgctttatgatctgctcaagcaatataagttgcagcaagcc
agctga
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