Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00677
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Entry
SPHFLASMR4Y_00677 CDS
T04949
Symbol
cirA
Name
(GenBank) colicin I receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfla02000
]
SPHFLASMR4Y_00677 (cirA)
Transporters [BR:
sfla02000
]
Other transporters
Pores ion channels [TC:
1
]
SPHFLASMR4Y_00677 (cirA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ASK87461
LinkDB
All DBs
Position
710494..713445
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AA seq
983 aa
AA seq
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MRKSLLLAATAISGMSVPAMAQGQDDGIIDSNVIIVTAQRQAQSAQDVPIAVSAFSQEAL
EAQQIENSSDLQLTLPNITFTKTNFTSSSFTIRGIGDLCVGVSCDQATAIHLNDQPLFST
RLFETEFFDLERVEVLRGPQGTLFGRNATAGVVNVVTAKPNMGEFQAAGDVEYGNYNALK
VKGMVNLPIGDSLAFRGAGIYVKRDGYTTNLNGGPDLDDRELYSIRGSLRFEPGPDTTID
LMASYFREDDNRMRIQKQYCQRDETGILGCLNNRRDAQAFNANATFTAALSSQEFLATQG
IPTAFALGSLYGPDQYEGIGIPSDPRTVNTAFTPEYFTSELTFQGKIEHDFGPISAQLSG
TYQKVKLDSRQDYNNNIGRRDIYAPALNTLAAAAAGLVPGLPASYFAPLASAIIPNGPNG
VLCTSDTDTIGLGSFGGNSNCATTPLQYDRSNQQNSSWSAEAIISSDLDGPFNFLLGAIY
ADYHLTENSYYVNAFAIDYVAGLLGSFTSLGGGLDPSYLGTPYFRNNTDDLTVKSYGLFG
EVYFDISDSLKLTGGLRYNNDKKNVQARSTLASFLVPYSQTTNAFESPFVGSFDADPGTP
GNQIFQNRQVKNDEITGRAVLDYKISDDNLVYISYSRGYKSGGLNPPLQPIFEVPESFRP
EQVDAFEFGSKNTFGNGALQLNLTAFYYKYKDLQLSKIVARTAVNENIDADIYGAEIEAI
IRPDPDWMINMGFSYLHTEVKGDTFNSDPRDFGGGRSDAVIIKDITNASNCAVTSTSGNA
AGVNAFVNSVNGVINAGLVPGLAAGAGLQPTVAFPADGGIASTGAFGICGVLEAAAAGAF
AGGGLDPAAFGGIEYFAAGVPKNIRGNDLPQAPKLKFSVGVQYTMNFDNGMSLVPRVDLA
YTGESYGSIFNGNVNRIDGYAQANAQIQLNGTDDRWYVRGFVQNIFDSNSETGLYVTDQS
SGLYTNVFTLEPRRYGIGAGFKF
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaatcgctactgttggctgctacagctatatctggaatgtccgtacctgccatg
gcgcagggtcaggatgatggtatcatcgacagcaatgtcattatcgtcaccgcacaacgc
caggcgcaaagcgcccaggacgtgccgattgcggtctccgcattttcacaagaggcgctc
gaggcgcagcagatcgagaatagttccgatctccagctcacgcttccgaatatcacgttt
accaaaaccaatttcacaagttcgagcttcacgatccgcgggatcggcgatctgtgtgtc
ggcgtgtcctgcgatcaggcgactgcgatccacctgaacgatcagccccttttctcgacg
cgtctgttcgaaacggaatttttcgatctggagcgggtggaagtcctgcgcggaccacaa
ggcacattgttcggacggaacgcgacggcaggcgttgtgaatgtggttaccgccaagccg
aacatgggcgagttccaggccgcgggtgacgtggaatatggcaattataacgcgctcaag
gtcaagggcatggtcaatctgccgatcggcgacagtctcgctttccgtggggccggaatc
tatgtgaaacgtgacggttacacgaccaacctcaatggaggccccgatctggatgaccgc
gaactctattcgatccgtggctcgctgcgttttgaaccggggcccgatacgacgatcgat
ctgatggcgtcctatttccgcgaagacgacaaccggatgcggatccagaaacaatattgc
cagcgcgacgagacgggtatcttgggatgtctgaacaaccgccgcgatgcccaggcattc
aatgccaacgcaactttcacggccgcattgtcttcgcaggagtttctcgcaacgcaaggc
ataccgacggccttcgctctgggcagcctctatggtcccgatcaatatgaaggcattggc
attccttccgacccgcgcacggtcaacaccgctttcacgccggaatattttaccagcgaa
ctgaccttccagggcaagatcgagcatgacttcggcccgatcagcgcgcagctttccggt
acctatcagaaagtgaaactggattctcgccaggattataataacaatatcggccgccgc
gacatttatgcacctgcattgaacacactcgctgccgctgcagcggggcttgttcccggc
cttccggcatcctattttgcgccccttgcttcggcgatcattcccaatggtccgaatgga
gtgctttgtacctcggacacagacacgattggtctcgggtcatttggcggcaacagcaat
tgtgcgacaacgccgctgcaatatgaccgatcgaaccagcaaaacagcagctggtcggcg
gaggccattatctcgagcgatctggatggcccgttcaacttccttctcggtgcgatctac
gcagattatcatctgaccgagaacagctattatgtgaatgcgttcgcgatcgactatgtt
gccggtttgcttggcagcttcacgtctctgggtggtggtttggatccgtcatatctcggc
acgccctatttccgcaacaatacggatgatctgactgtcaaatcctatggcttgttcggt
gaagtctatttcgacatcagcgacagtctgaagctgacgggcggtttgcggtataataat
gacaagaagaacgtgcaggcgcggtcgacgctagccagtttcctggttccctatagtcag
acgaccaacgcgttcgaatctccctttgtcggatcattcgatgcggaccctggcacacca
ggcaatcagattttccagaaccgccaggtcaaaaacgacgaaatcaccggccgcgcggtt
ctcgattacaagatatccgacgacaatctggtctatatttcttattcccgtggctacaag
tcaggcggtctgaacccgccgctgcagcccattttcgaggtcccggaatccttccggccc
gagcaggttgatgcgttcgaatttggttcgaagaacacctttggcaatggcgcgctgcaa
ctcaacctgacggccttctattataaatataaggatctgcagctcagcaaaattgtcgcc
cggaccgcggtgaacgagaatatcgatgcggatatctacggtgcggaaatcgaggcgatt
atccgccctgatccggactggatgatcaacatgggtttcagttatctgcacaccgaagtg
aagggggatacattcaacagcgatccgcgtgacttcggcggtggccgctcggatgccgtg
atcatcaaggatatcaccaatgcctccaactgtgccgtcacttccacatccggaaatgct
gccggggtgaatgccttcgtcaacagcgtgaacggagtaatcaacgccggtctggttccc
ggactggctgccggagcagggctccagccaacggttgctttcccggctgatggcggcatt
gcctccaccggtgccttcggtatttgcggcgttctcgaagccgctgcggcgggtgcgttt
gccggcggcggtctggacccggcggcctttggcggaattgagtatttcgctgccggtgtg
ccgaaaaatattcggggaaatgacctgcctcaggcgccaaagctgaaattctccgtcggc
gttcaatataccatgaacttcgacaatggcatgagcctggtcccgcgtgttgacctggct
tataccggcgagagctatggcagcatcttcaacggcaatgtcaaccggatcgacggctac
gcccaggccaatgcccagattcagctgaacggtacggatgaccgctggtatgtccgcggg
tttgtccagaatatcttcgacagcaattcggagaccggtctctacgtgaccgaccagtct
tcgggtctctacaccaatgtcttcacgctggagccccggcgctatggcatcggagccggc
ttcaaattctga
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