Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00794
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Entry
SPHFLASMR4Y_00794 CDS
T04949
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00071
Fatty acid degradation
sfla00362
Benzoate degradation
sfla00650
Butanoate metabolism
sfla01100
Metabolic pathways
sfla01120
Microbial metabolism in diverse environments
sfla01200
Carbon metabolism
sfla01212
Fatty acid metabolism
Module
sfla_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SPHFLASMR4Y_00794 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SPHFLASMR4Y_00794 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SPHFLASMR4Y_00794 (fadB)
Enzymes [BR:
sfla01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SPHFLASMR4Y_00794 (fadB)
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
ApbA
Motif
Other DBs
NCBI-ProteinID:
ASK87575
UniProt:
A0A220W432
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Position
complement(825826..827862)
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AA seq
678 aa
AA seq
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MSVVTTEKHGNVLVIISNNPPVNALGAAVRQGLVDGIEEALSDDGVEAVVIRCDGRTFFA
GADITEFGKPMKGPNLGEAIDRLEASSKPVVAAIHGTALGGGCEVALACHYRVAVPSAKM
GLPEVKLGLIPGAAGTQRLPRIVGAEAALPLVVIGNPVSATKAKAIGLVDALVGEDSLAD
DAIAFARQQIGKEPPRSSAGTANQDGVKNPAIFDEFRQKNGRKIRGFDAPEAAIQAVKAA
GELSYADGVAKERELFTKLITGTQSAAMRHYFFAERAANKIDGIDPKIDLIPIRKVGILG
AGTMGGGIGMNFLSAGIPVTIVELKEEALERGVGVIRKNYENTAKRGRMTEQQVEDAMSI
LTPSLSYDDLADCDLVIEAVFENMDVKKDVFTKLDAIVKQGAILASNTSYLNIDEIAAVT
KRPEYVIGLHFFSPANVMKLLEIVRGDKTADDVLMTAMKLSKKIGKVAAVSGVCPGFIGN
RMLSPRQEQANQMIMEGANYWDVDDVLLDFGFPMGPFQMSDLAGVDIGWHRDPERIETLR
DALCAVGRWGQKVGKGFYDYDEARQRTPSDEVKAIIANFAAKSGKEQREISKDEIRERLL
YPMVNEGAKILEEGMAQRASDIDVVWINGYGWPLYTGGPMFWADTVGLDNVVAGLEKHDL
AVAKLLKEKANAGGTFNG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgtcaccactgaaaaacatggcaatgttctggtcatcatctcgaacaaccct
ccggtcaatgcgctgggtgcggcggttcgccagggcttggtcgatggtatcgaagaggca
ttgtccgatgatggcgttgaggctgtggtgatccgctgtgacggacggacattttttgcc
ggcgccgacattacggaattcggcaagccgatgaagggccccaatctcggcgaagcgatc
gatcgcctcgaggcaagcagcaagcccgtggtcgccgcgatccatggcaccgctctgggt
ggcggctgtgaagtggctctggcctgtcattaccgggttgcggttccatctgccaagatg
gggcttccggaagtgaaattgggcctgatcccgggagcggccgggacccagcgcctgccg
cggatcgtcggcgcggaggcggccctgccactggttgtcattggcaacccggtatcggcg
acaaaagccaaagccatcggactggtcgacgcgctggttggcgaagacagcctggcggac
gatgcaatcgcttttgctcgccagcaaatcggcaaggagccaccccggtcttccgcaggc
acagccaatcaggatggtgtgaagaaccccgctatctttgacgagttccggcagaagaac
ggccggaagattcgcggatttgacgcccccgaggcggctattcaggcagtgaaggcggcc
ggtgaactctcttatgcagacggcgtggcgaaagaacgcgagcttttcacgaagctgatc
accggcacccagtcggctgccatgcggcactatttcttcgcggaacgtgcggccaacaag
atcgacggtatcgaccccaagatcgacctgattccgatcaggaaggttggcatattgggt
gccggaacgatgggcggcggtatcggcatgaactttctgtcagccggcattccggtaacc
attgtcgagctcaaggaagaggcgctcgagcgtggcgttggcgttatccggaaaaattat
gaaaataccgccaagcgtggacggatgaccgagcagcaggtcgaagatgccatgagcatc
ttgacgcccagcctgtcctatgatgatcttgcagactgcgatctggtgatcgaggcggtg
ttcgagaatatggatgtcaaaaaggacgtgttcaccaaactcgatgcgatcgtgaaacag
ggcgcgatcctggccagcaacaccagctatctcaatatcgacgaaattgccgcggtaaca
aaacgccccgaatatgtgatcggtctgcacttcttctcgcctgccaatgtcatgaagctg
ctggaaatcgtgcgtggcgataaaaccgctgatgacgtgctgatgacggcgatgaagctg
tcgaagaaaatcggcaaggttgcagcggtttccggagtctgtcccggcttcatcggcaac
cggatgctcagcccgcgtcaggaacaggccaatcagatgatcatggaaggggccaattac
tgggatgtcgacgacgtattgctcgatttcggttttccgatggggcctttccagatgtcc
gatctggccggtgtcgacattggttggcatcgcgatccggaacgcatcgaaacgttgcgg
gacgccctttgtgccgttggccgctggggccagaaggtcggcaagggattttatgattat
gacgaggcgcgtcaacgcacgccgtctgacgaagtcaaagcgatcattgccaactttgcc
gccaagagtggcaaggagcagcgggaaatttccaaggacgagatccgggagcgtttgctc
tatcccatggtcaatgaaggcgccaaaatcctcgaagaaggcatggcgcagcgagcgagc
gatatcgatgtcgtctggataaacggttacggttggccgctttacactggcggtccgatg
ttctgggccgatacggtagggctcgacaatgtcgttgccgggcttgagaaacatgatttg
gcagttgccaaattgctgaaggaaaaagccaacgcgggaggcacgtttaacggctag
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