KEGG   Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00804
Entry
SPHFLASMR4Y_00804 CDS       T04949                                 
Symbol
lpd
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sfla  Sphingorhabdus sp. SMR4y
Pathway
sfla00010  Glycolysis / Gluconeogenesis
sfla00020  Citrate cycle (TCA cycle)
sfla00260  Glycine, serine and threonine metabolism
sfla00280  Valine, leucine and isoleucine degradation
sfla00310  Lysine degradation
sfla00380  Tryptophan metabolism
sfla00620  Pyruvate metabolism
sfla00630  Glyoxylate and dicarboxylate metabolism
sfla00640  Propanoate metabolism
sfla00670  One carbon pool by folate
sfla00785  Lipoic acid metabolism
sfla01100  Metabolic pathways
sfla01110  Biosynthesis of secondary metabolites
sfla01120  Microbial metabolism in diverse environments
sfla01200  Carbon metabolism
sfla01210  2-Oxocarboxylic acid metabolism
sfla01240  Biosynthesis of cofactors
Module
sfla_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sfla_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfla_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sfla_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sfla00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SPHFLASMR4Y_00804 (lpd)
   00020 Citrate cycle (TCA cycle)
    SPHFLASMR4Y_00804 (lpd)
   00620 Pyruvate metabolism
    SPHFLASMR4Y_00804 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    SPHFLASMR4Y_00804 (lpd)
   00640 Propanoate metabolism
    SPHFLASMR4Y_00804 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SPHFLASMR4Y_00804 (lpd)
   00280 Valine, leucine and isoleucine degradation
    SPHFLASMR4Y_00804 (lpd)
   00310 Lysine degradation
    SPHFLASMR4Y_00804 (lpd)
   00380 Tryptophan metabolism
    SPHFLASMR4Y_00804 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SPHFLASMR4Y_00804 (lpd)
   00670 One carbon pool by folate
    SPHFLASMR4Y_00804 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfla04147]
    SPHFLASMR4Y_00804 (lpd)
Enzymes [BR:sfla01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SPHFLASMR4Y_00804 (lpd)
Exosome [BR:sfla04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SPHFLASMR4Y_00804 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 DAO HI0933_like NAD_binding_8 FAD_oxidored FAD_binding_3 GIDA Lys_Orn_oxgnase 3HCDH_N 2-Hacid_dh_C UDPG_MGDP_dh_N Thi4 DUF5760 AlaDh_PNT_C Amino_oxidase
Other DBs
NCBI-ProteinID: ASK87584
UniProt: A0A220W452
LinkDB
Position
complement(840415..841827)
AA seq 470 aa
MANAYDLIVLGSGPGGYVAAIRASQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEVF
HNMKHAADYGLAAEKISADLDAIVKRSRGVAKQLNQGVTGLMKKNKIDVVMGDGTISAPG
KLTVKTDKGEEELTAKNIIIATGARARDLPFAKADGKRIWTYRHAMTPSETPTKLLVIGS
GAIGIEFASFYNDIGVDVTVVEMLDRIVPVEDEEISKFLEKSLKKQGMTIMTGAGVKSIE
TGDKGVKAEIEDSKGKKETHDFSHVIVAVGIQPNIETIGLDELGVQPDERYHIKTDEYCR
TNIDGIYAIGDCTAGPWLAHKASHEGVIAAEAIAQSMGKDAHPHVMDVNNIPGCTYCHPQ
IASVGLTEAKAKEAGHDVKVGKFPFIGNGKAIALGETEGFIKTVFDAKTGELLGAHMIGA
EVTELIQGYTIGKTLETTEAELANTVFPHPTLSEMMHESVLDAHGRVLHM
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggcaaacgcttacgatctcatcgttctcggttccggccccggcggctatgtcgcggct
atccgggcctcgcaacttggtctcaagaccgcgattgtcgagcgcgaaaatcttggcgga
atctgtctcaactggggttgtatcccgaccaaagcgttgctgcgctccgccgaagtcttc
cacaatatgaaacatgcggcggattatggtctggctgccgagaagatcagcgccgatctc
gacgcgatcgtcaaacgctcccgcggtgtcgccaagcagctcaaccagggtgtcaccggc
ctgatgaagaagaacaagattgatgttgtcatgggcgatggcacgattagcgcgcccggc
aaactgaccgtgaagacggacaagggcgaggaagaactgaccgcaaagaatatcattatc
gcgaccggcgcccgtgcccgcgacctgccgttcgcaaaggccgacggcaagcggatatgg
acctatcgccatgcaatgacgccgagcgaaacaccgaccaagttgctggtcatcggttcc
ggggcgatcggcattgagtttgccagcttctacaatgatataggcgttgatgttacggtt
gtggagatgctcgaccggatcgtgccggtggaagacgaggaaatctcgaaattccttgaa
aagtcgctgaaaaagcagggcatgacgatcatgaccggtgctggcgtgaagagcatcgaa
actggcgacaaaggtgtcaaggcagagatcgaggatagcaagggcaagaaagagactcac
gatttcagccacgtcatcgtcgccgtcggcatccagcccaatatcgagaccatcggcctc
gacgaactcggcgtgcagccggacgaacgctatcatatcaagaccgacgaatattgccgg
accaatatcgatggcatttacgcgatcggcgactgcaccgctggcccctggctggcgcac
aaggcgagccatgaaggcgtcatcgccgctgaagcgattgcccagtcgatgggcaaggac
gcccatccgcatgtcatggacgtcaataatatccccggctgcacctattgccacccgcag
atcgccagcgtcggtctgaccgaagccaaggcgaaggaagcgggtcatgacgtcaaggtc
ggtaaattccccttcattggcaacggcaaggcgattgcgctgggcgagaccgagggcttc
atcaagaccgtgtttgacgccaagacgggggaattgctcggcgcccacatgatcggcgcg
gaagtcaccgaactgatccagggctacaccatcggcaagacgctcgaaaccaccgaggcc
gaactggccaacacagttttcccgcatccgactctgagcgaaatgatgcacgagagcgtg
ctggatgctcacgggcgtgttttgcacatgtga

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