Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00820
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Entry
SPHFLASMR4Y_00820 CDS
T04949
Symbol
pccB
Name
(GenBank) propionyl-CoA carboxylase beta chain
KO
K01966
propionyl-CoA carboxylase beta subunit [EC:
6.4.1.3
2.1.3.15
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00280
Valine, leucine and isoleucine degradation
sfla00630
Glyoxylate and dicarboxylate metabolism
sfla00640
Propanoate metabolism
sfla01100
Metabolic pathways
sfla01110
Biosynthesis of secondary metabolites
sfla01120
Microbial metabolism in diverse environments
sfla01200
Carbon metabolism
Module
sfla_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPHFLASMR4Y_00820 (pccB)
00640 Propanoate metabolism
SPHFLASMR4Y_00820 (pccB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SPHFLASMR4Y_00820 (pccB)
Enzymes [BR:
sfla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.15 acetyl-CoA carboxytransferase
SPHFLASMR4Y_00820 (pccB)
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
SPHFLASMR4Y_00820 (pccB)
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GFIT
Motif
Pfam:
Carboxyl_trans
ACCA
MdcE
OHCU_decarbox
HflK_N
Motif
Other DBs
NCBI-ProteinID:
ASK87600
UniProt:
A0A220W453
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All DBs
Position
complement(859873..861399)
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AA seq
508 aa
AA seq
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MSDIIAQLEAKRAEAMLGGGQKRIDSQHAKGKLTARERIEILLDEDSFEEIDMYVEHNCV
DFGMEQTKIAGDGVVTGSGTINGRLVFVFSQDFTVFGGSLSERHAEKICKVLDNAMKVGA
PVIGINDSGGARIQEGVASLGGYADVFQKNVLASGVIPQLSLIMGPCAGGAVYSPAMTDF
IFMVKDSSYMFVTGPDVVKTVTNEIVTQEELGGAVTHTTKTSVADVAYENDIEALLAARD
FIDFMPLSNREEAPERPTADPWDRLEESLDTLIPANANQPYDMHEVIRKMLDEGDFFEVQ
PAHASNIICGFGRMEGATVGVVANQPMVLAGCLDINASKKAARFVRYCDAFNIPIVTLVD
VPGFLPGTSQEHNGIIKHGAKLLFAYAEATVPKITIITRKAYGGAYDVMASKHLRGDLNY
AWPTAEIAVMGAKGAVEIIFRGRTEEEIAERTAEYEARFANPFVAAQKGFVDEVIMPHST
RRRVALGLRKLRNKQLENPWKKHDNIPL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacattatcgcacaattggaagccaaacgcgctgaagccatgctcggcggcggg
caaaagcggatcgatagccagcatgccaagggcaagctgaccgcgcgcgagcggatcgaa
atcctgctcgacgaagattcgttcgaagagatcgacatgtatgtcgagcataattgcgtc
gatttcggaatggaacagaccaagatagccggtgacggcgtggtcaccggatcgggcacg
atcaacggccggctggtctttgtttttagccaggatttcaccgttttcggcggctcgctc
tccgagcgccatgccgagaaaatctgcaaggtcctcgacaatgcaatgaaagtcggcgca
ccggtgatcggcatcaacgacagcggcggcgcgcgtattcaggaaggcgtggcgtcactc
ggtggctatgccgacgtgttccagaagaatgttctggccagcggcgtgattccacaactc
agcctgatcatggggccctgtgccggcggcgcggtctattcaccggcgatgaccgacttc
atcttcatggtaaaggacagttcgtacatgttcgtgaccgggcccgatgtggtcaagacg
gtgaccaacgagatcgtgacacaggaagaactgggcggggcggtgacgcacaccaccaag
accagcgtcgccgatgtcgcctatgaaaatgatatcgaggcgctgctcgcggcccgcgac
ttcatcgacttcatgccgctttccaatcgggaagaagccccagaacggccgacagccgat
ccgtgggatcgtctcgaggaaagtctcgacacgctgattcctgctaatgccaatcagccc
tatgacatgcacgaagtcatccgcaagatgctcgacgagggcgatttctttgaagtccag
cccgcccatgcctccaatatcatctgcggctttggccggatggaaggtgccactgtcggt
gtcgtcgccaaccagccgatggtgcttgccggttgtctcgacatcaatgcatcgaagaaa
gcggcccgctttgtccgctattgcgatgcattcaatattccgatcgtgacactggttgac
gttccaggcttcctgcccggtacttctcaagagcataacggtatcatcaagcatggtgcg
aagctgctctttgcctatgccgaagcgacggtgccgaaaatcaccatcatcacccgcaag
gcttatggcggcgcctatgacgtgatggcgtccaagcatctgcgcggcgatctcaactat
gcctggccgaccgcggaaatcgcggtgatgggtgcaaagggcgcggtcgagatcatcttc
cgcggcaggaccgaggaagagattgccgagcgtaccgcggaatatgaagcacgcttcgcc
aatccgtttgtcgcggcgcaaaagggcttcgtcgacgaggtgatcatgccccattcaacc
cggcgccgggtggctctgggacttcggaaactgcggaacaagcaattggagaatccgtgg
aaaaagcatgacaatattccgttgtga
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