Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00834
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Entry
SPHFLASMR4Y_00834 CDS
T04949
Symbol
ldc
Name
(GenBank) lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00330
Arginine and proline metabolism
sfla00480
Glutathione metabolism
sfla01100
Metabolic pathways
sfla01110
Biosynthesis of secondary metabolites
sfla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SPHFLASMR4Y_00834 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SPHFLASMR4Y_00834 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SPHFLASMR4Y_00834 (ldc)
Enzymes [BR:
sfla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SPHFLASMR4Y_00834 (ldc)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ASK87614
UniProt:
A0A220W481
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Position
877814..879013
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AA seq
399 aa
AA seq
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MRYYHDAEELTKALSPDIPVLLNRPHAARRAARYFVEQFPGKALYAVKANPSPALLQLLW
EEGVTHFDVASIDEVRIVRAALPEATLCYMNPVKQLASVREAYHEHGVRIFSLDSIEELE
KIELGTDSAEDLTLCVRIRVASEFAEISLASKFGIDVDESAELLQRARQRADCLGICFHV
GSQAMTPLAYVHALERVRNAIVGASVTVDIVNVGGGFPSIYPDLAPVSLNHYFTAIDRTF
EDLPISYSAELWCEPGRALSAEYSSLVVKVERRRGNELYINDGAYGTLFDAAHIGWRFPV
RKIGAEEEDGATTGFSFYGPTCDDMDFMAGPFNLPDSIKAGDYIEIGMLGAYGSAMRTKF
NGYGSSEEYDVTDEPMASLYVGENLDRSDRENVVSFPTA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctattaccatgatgccgaggagctgacgaaggctcttagcccagatattccagtt
ttgcttaaccggccacacgcagcgcgtcgcgccgcgcgttattttgtcgagcaatttccc
ggcaaggcactttatgcggtgaaggcgaatccttccccggccttgctgcaactgttgtgg
gaagaaggcgtgacccatttcgatgtcgcgtcgatcgacgaagtacggatcgtccgcgcc
gcgctgccggaagccacgctttgctacatgaacccggtcaaacagctggcctcggtgcgc
gaagcctatcacgagcatggcgtgcggatattctcgctcgacagtatcgaggaactggaa
aagatcgaattgggaaccgactcggccgaagacctgacgctctgcgtccggattcgcgtg
gcatcggaatttgccgaaatcagccttgcctccaaattcggcattgatgtcgatgaatcg
gcagaactgctgcagcgggcccggcagcgggcagattgcctcggcatctgttttcatgtt
ggtagccaggcgatgacgccgctcgcctatgtccacgcgctggaacgcgtgcgcaatgcc
atagtcggcgcttcggtcacggtagacatcgtcaatgtcggcggcggttttccgtcgatc
tacccggatctggcgccggtatcgctcaaccattatttcaccgccatcgaccgtacgttc
gaggatctgccgatcagctattccgccgaactctggtgtgagccaggccgggccctgtcg
gccgaatatagctcgctggtggtcaaggtcgaacgacgccgtggcaatgagctctatatc
aacgacggcgcctatggcaccctgttcgacgcggcgcatatcggctggcgttttccggtg
cggaaaatcggtgccgaagaggaagacggcgcgaccaccggcttcagcttctatggtccg
acctgcgacgacatggatttcatggccggaccgttcaacctgcccgacagcatcaaggcc
ggcgactatatcgagattggtatgctcggcgcctatggatcggcgatgcggaccaagttc
aacggctatggcagcagcgaggagtatgacgtcaccgacgagccgatggcgagcctctat
gtcggcgaaaatctcgatcgttccgaccgggaaaatgtcgtgtcctttccgaccgcctaa
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