Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00864
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Entry
SPHFLASMR4Y_00864 CDS
T04949
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla02024
Quorum sensing
sfla03060
Protein export
sfla03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SPHFLASMR4Y_00864 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SPHFLASMR4Y_00864 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPHFLASMR4Y_00864 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfla02044
]
SPHFLASMR4Y_00864 (ffh)
Enzymes [BR:
sfla01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SPHFLASMR4Y_00864 (ffh)
Secretion system [BR:
sfla02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SPHFLASMR4Y_00864 (ffh)
Eukaryotic Sec-SRP protein
SPHFLASMR4Y_00864 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
AAA_33
AAA_16
ABC_tran
cobW
AAA_19
NACHT
AAA_31
DnaB_C
AAA_17
YqeC
AAA_14
NPHP3_N
AAA
ResIII
Thymidylate_kin
AAA_24
GTP_EFTU
APS_kinase
VirC1
MMR_HSR1
FAD_binding_4
AAA_5
AAA_28
AAA_7
DO-GTPase1
KTI12
6PF2K
ATPase_2
ArsA_ATPase
FliG_N
Motif
Other DBs
NCBI-ProteinID:
ASK87644
LinkDB
All DBs
Position
complement(906426..907889)
Genome browser
AA seq
487 aa
AA seq
DB search
MFDKLSDRLGGVFDKLRGRGALREEDVRGAMREVRIALLEADVALPVVKDFVEKVTEQAV
GQSVLKSVTPGQQVVKIVNDGIAEMLGSEVSGLELSVAPPAIIMMVGLQGSGKTTTTAKI
AKRLKDKENKKVMMASLDVNRPAAQEQLAVLGEQINAATLPIVAGQQPVEIAKRALQAAK
LQGFDVLLLDTAGRLHVDQQLMDEMKAVSDIAKPQETLLVVDALTGQDAVNVAQNFSEQV
DLSGVVLTRMDGDARGGAALSMRAVTGKPIKFVGVGEKIDALEEFHPERVAGRILGMGDV
VSLVEKAAQVVDKEESEALAEKMLKGQFDLNDLRSQLNQMTKMGGLGAMASMMPGMKKAK
AAMAGGAMDEKVLVRMDAIIGSMTKEERSRPGLLNAKRKRRVAIGSGTTVQDVNKLLKMH
QEMAKAMKRIKKMGGIKGLMSMFGGGGGAAGAGMGGQDGGLAGMPGLPDMQSGGLPPDLA
NLLNKKK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataagttgagcgaccgccttggtggagttttcgacaagctgcgcgggcgcggc
gccctgcgggaagaagatgttcgcggtgccatgcgggaagtgcggattgcattgctcgaa
gccgacgtcgcgcttcccgtcgtcaaggatttcgttgaaaaggtcaccgaacaggcggtt
ggccagtcggtcctcaaatcggtcacgccgggtcagcaggtggtcaagatcgtcaatgac
ggtattgccgaaatgctgggttcggaggtcagcggccttgaactgtcggtcgcgccgccc
gccattatcatgatggtcggcctgcagggttccggtaaaaccaccacgacggccaagatc
gccaaacggctgaaggacaaagagaacaagaaggtcatgatggcctcgctcgatgtcaat
cgtcctgcggcgcaggaacaactggcggtactgggcgagcagatcaatgctgccaccctg
ccgatcgtcgctggtcagcagccggtcgagattgccaagcgcgctttgcaggcggccaaa
ttgcagggcttcgatgttctgcttctggataccgccggacggctgcatgtcgatcagcag
ctgatggacgagatgaaggcggtttccgacattgccaagccgcaggaaaccctgctggtg
gtcgatgcactgactggacaggacgccgtcaatgtggcgcagaatttctccgaacaggtc
gatctgagcggtgttgttctgacccggatggatggcgatgcccgcggcggtgcggcgcta
tcgatgcgggccgtcacgggcaagccgatcaaatttgtcggtgtcggcgagaaaatcgat
gcgctggaagaattccacccggaacgggtcgccggccggatcttgggcatgggcgacgtt
gtcagcctggtcgaaaaggcggcgcaggtcgtcgacaaggaagagtccgaagcgctcgcc
gagaaaatgctcaagggtcagttcgacctcaacgatctccgctcgcagctcaaccagatg
acaaaaatgggtggcctgggtgccatggcatcaatgatgccgggcatgaaaaaggcgaaa
gcggcgatggccggcggcgcgatggacgaaaaggttctggttcgcatggatgccattatc
gggtcgatgaccaaagaagagcggagccggccaggactgctcaacgccaagcgcaagcgg
cgggtcgcgatcggttccggtaccacggtgcaggacgtcaacaagctgctcaaaatgcat
caggaaatggccaaggcgatgaagcgcatcaagaagatgggcggaatcaagggtctgatg
tcgatgtttggcggcggtggcggagccgctggcgccgggatgggcggccaggatggcggc
ctcgccggtatgcccgggttgcccgacatgcaatcgggcgggctcccccctgatctggca
aatttattgaacaagaagaaatag
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