Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00938
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Entry
SPHFLASMR4Y_00938 CDS
T04949
Symbol
pth
Name
(GenBank) peptidyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sfla03012
]
SPHFLASMR4Y_00938 (pth)
Enzymes [BR:
sfla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
SPHFLASMR4Y_00938 (pth)
Translation factors [BR:
sfla03012
]
Eukaryotic type
Release factors
SPHFLASMR4Y_00938 (pth)
Prokaryotic type
SPHFLASMR4Y_00938 (pth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
Motif
Other DBs
NCBI-ProteinID:
ASK87714
UniProt:
A0A220W4I8
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All DBs
Position
977892..978461
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AA seq
189 aa
AA seq
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MQLWVGLGNPGAQYAMHRHNVGFMVIDALEEVHGFPPPKQKFKGWTMEARLGGEKLILLK
PATFMNESGNSVRAAMDFYKLQPEDVTVFYDELDLEPFKIKVKRGGGAAGHNGIRSMIAH
IGPEFRRVRIGIGHPGTKSRVTGHVLGNYAKSEIDDLAHMLGVIADEADWLAKGDDPRFM
SEVAMRMQD
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcaactatgggtcggccttggcaatccgggtgcgcaatatgcgatgcaccggcacaat
gtcggcttcatggtgattgatgcgcttgaagaagtgcacggttttccaccacccaagcag
aagttcaaggggtggaccatggaagcgcggctgggcggtgagaaactgatcctgctcaaa
cccgcaaccttcatgaacgaaagcggcaacagcgtccgcgcggccatggatttctacaaa
ttgcagccggaagatgtcaccgtcttctatgacgagctcgatctcgaaccgttcaagatc
aaggtaaagcgcggcggcggtgcggcgggccataatggcataagatcgatgatcgcccat
atcggccccgaattccgccgcgtgcgcatcggtatcggccatcccggtaccaagtcacgg
gtgaccggccatgtgctcggcaattatgcgaagtcggaaattgacgatctcgcccatatg
ctcggggtgattgctgacgaagccgactggctggcgaaaggcgatgatccgcgcttcatg
agcgaagtcgccatgcggatgcaggattag
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