Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00978
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Entry
SPHFLASMR4Y_00978 CDS
T04949
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfla03016
]
SPHFLASMR4Y_00978 (truA)
Enzymes [BR:
sfla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SPHFLASMR4Y_00978 (truA)
Transfer RNA biogenesis [BR:
sfla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPHFLASMR4Y_00978 (truA)
Prokaryotic type
SPHFLASMR4Y_00978 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ASK87752
UniProt:
A0A220W4J8
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All DBs
Position
1018095..1018853
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AA seq
252 aa
AA seq
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MTRFAITLEYDGRPFMGWQHQDHGPSVQQAVEQAIHKITGQDVRVFAAGRTDAGVHALAM
RAHFDLDTKLTPFRLSEGINAGLRPHPVAVLACDIVDEQWHARFACEGRRYLYKITNRRA
PLTFDRGLSWQVAPALDSDAMHNAAQVLTGQHDFTTFRSTHCQAQSPVKTLDSISVSRFG
EEIEVEVAARSFLHHQVRSIVGCLKLVGTGKWSKGDLKNALAARDRNALGFNAPPDGLYF
VEAIYPTDLEPE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgacccgttttgcgatcactctggaatatgatggccgtccgttcatgggctggcagcat
caggatcacggcccgagcgtccagcaggccgtcgagcaggcgatccacaagatcaccgga
caggacgtgcgtgtttttgccgccggcagaaccgacgccggtgtccacgcgctggcgatg
cgcgcccattttgatctggacacgaagctgaccccgttccgcctgagcgaaggcatcaat
gccgggttgcgcccgcaccctgtggcggtgcttgcctgcgacatcgttgacgagcaatgg
catgcccgcttcgcctgtgagggtcggcgctatctctacaagattaccaatcgccgggcg
ccgctgacctttgaccgcggcctgagctggcaggttgcgccggcactcgacagcgatgcc
atgcacaatgccgcgcaagtgctgaccgggcagcatgatttcaccactttccgttcgact
cattgccaggcgcaaagcccggtcaagacgctcgacagcatatctgtcagccgcttcggc
gaagagatagaggtggaggtagccgcccgctcgttcctgcaccatcaggtgcgctcgatc
gtcggttgtctgaagctggtcggcaccggcaaatggtcgaaaggggatctgaaaaacgcg
ctggcagcgcgagatcgcaacgcgctcggtttcaacgcgccgcccgatggcctttatttc
gtcgaggcgatctatccgactgatttagagcccgaataa
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