Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01013
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Entry
SPHFLASMR4Y_01013 CDS
T04949
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfla03032
]
SPHFLASMR4Y_01013 (gyrA)
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_01013 (gyrA)
Enzymes [BR:
sfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SPHFLASMR4Y_01013 (gyrA)
DNA replication proteins [BR:
sfla03032
]
Prokaryotic type
DNA Topoisomerases
SPHFLASMR4Y_01013 (gyrA)
DNA repair and recombination proteins [BR:
sfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SPHFLASMR4Y_01013 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ASK87783
UniProt:
A0A220W4Q4
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All DBs
Position
1050216..1052981
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AA seq
921 aa
AA seq
DB search
MNEQTTPPSPSNIEPIDIVDEMKTSYMDYAMSVIVSRALPDVRDGLKPVHRRILFAAQEG
GMVAGRPYRKCAKIVGDVMGNYHPHGDSAIYMALARMTQDWSMRVPLVDGQGNFGSMDPD
MPASMRYTEARLNKVSNFLLNDLDKDTVDFIPNYDGSLQEPSVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVVNASLAYIDNPAITIDELIEIVPGPDFPTAPLILGQSGARAAYKD
GRGSIMMRARHEIEEGRGDKRSIVLTSIPFQIGKSALVEKIAEAAKDKRIEGVSDIRDES
SRAGVRVVIELKRDATPDVVLNQIWRFTPAQSSFPANMLAIRGGRPEVLTLRDIIESFVK
FREEVITRRTKFELNKARERAHILLGLVVAVTNMDEVVRIIRGSSTPAEARESLLRREWP
IAEIAPYIRLVEATETDVEGDSYKLSPVQVKAILDLRLQKLTALGREEIGDELKELAAAI
EEYLAILADRAKLYAVMREELEEVRDQFATPRLSEITAAWDGLEDEDLMERSEMVVTVTH
GGYIKRTPLDTFRAQRRGGKGRAGMATKEEDAVTELFVTSTHTPVLFFSTHGKVYRLKVW
KLPEGGPQTKGRPMINLLPLADGETISTVLPLPEDEAEWADLHVMFATAKGSVRRNSMDS
FTNVPSNGKFAMKFDEDSDDRLIGVKLLTDGDDVLLATRNGKAIRFAGNAVRSFQSRTST
GVRGIALKGDDEVISLSVLRGFEASTEERDQYLKAAPWKDNENAPELSAERMAEFSATED
FILTVCANGYGKRSSAYEYRQSGRGGQGILNIDNIKRNGTVVASFRASDDEQVMLVTDQA
KLIRMKVADMRVIGRNSSGVKLFNVAQGEHVVGAAKIDEEEEPENDAEDAVVEEMVDQGV
SDGDVAVTDDTGDETPEDSSE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaacaaaccactccgccctcgccgtccaatatcgaaccgatagacatcgtcgac
gagatgaaaaccagctacatggattatgccatgtcggtcatcgtcagccgtgcgctgcct
gatgtccgtgacggcctgaagccggttcatcgccgcatattatttgccgcccaggaaggc
ggtatggttgccggacggccctatcgcaaatgcgcaaagatcgtcggcgacgtgatgggc
aactatcacccgcatggcgacagcgcgatttatatggctctcgcccggatgacccaggac
tggtcgatgcgggtcccgctggtcgacggtcagggcaatttcggctcgatggaccccgac
atgcccgcttcgatgcgttataccgaggcacggctgaacaaggtctccaatttcctgctc
aacgatctcgacaaggatacggtcgacttcatccccaattatgacggcagcctgcaggaa
ccgtccgtgctccctgcccgcttccccaacctgctggtcaacggcgctggcggtatcgcg
gtcggcatggccaccaacattccgccgcacaatctcggtgaagtggtcaacgccagcctc
gcctatatcgacaatcccgctatcacgatcgatgaactgatcgagatcgttcccggcccc
gactttccgaccgcgccgctgatcctgggccagtcgggcgcccgcgccgcctacaaggat
ggccgcggatcgatcatgatgcgcgcccgtcacgagatcgaggaaggacggggcgacaaa
cgttcgatcgttctgacctccatccctttccagatcggcaagtcggctctggtcgaaaaa
atcgccgaagccgccaaggacaagcggatcgagggcgtatccgatatccgcgacgaatcc
agccgcgccggggtgcgggtggtgatcgagctgaaacgcgacgcaacccccgatgtagtg
ctcaaccagatctggcgcttcacccctgcccagtcgagcttcccggccaatatgctcgcg
attcgcggcggccggcccgaagtgctgactttgcgcgacatcatcgaatccttcgtcaaa
ttccgcgaggaagtcatcacccgccgcaccaagttcgagctgaacaaggcgcgtgaacgg
gcacatatcttgctcggcctggtggttgcagtcaccaatatggacgaggtcgtccggatc
atccgcggttcctccacgcctgcggaagcccgcgaatcgctgctccgccgcgaatggccg
attgccgaaatcgcgccctatatccggctggtcgaagcaaccgaaaccgatgtcgagggc
gacagctacaagctttccccggttcaggtaaaagcgatactggatctgcgtctgcagaag
ctgacggcgctcggccgcgaggaaatcggcgacgagctgaaggagcttgctgccgcgatc
gaggaatatctcgcgatactggccgaccgcgcgaaactctatgcggtgatgcgcgaagag
ctggaagaagtgcgcgaccaattcgcaacgccgcgcctgtcggaaatcaccgccgcctgg
gatggtctggaagacgaggatttgatggaacggtccgagatggtcgtgaccgtcacccat
ggcggctatatcaagcggaccccgctcgacacgttccgtgcccagcgccgcggcggcaag
ggccgcgccggcatggcgaccaaggaagaggatgcagtcaccgaattgttcgtgacctcc
acccatacgccggtcctgttcttttcgacccatggcaaggtctatcgcctgaaggtctgg
aaactgccggaaggcggcccgcaaaccaaggggcggccgatgatcaacctgctgccgctg
gcagacggagaaaccatttccaccgttctgccgttgccggaagacgaagcggaatgggcg
gatttgcacgtcatgttcgcaaccgccaagggcagcgtccggcgcaacagcatggacagc
ttcaccaacgtgccgtccaatggcaagttcgcaatgaaattcgacgaggacagcgatgac
cgcctgatcggtgtgaagctgctgaccgacggtgacgatgtgctgctcgccaccaggaac
ggcaaggcgattcgttttgccggaaacgctgtccgctcgttccagagccggacctctacc
ggtgtccgcggcatcgcgctgaagggcgatgacgaggttatctcgctgtccgtcctgcgc
ggtttcgaagcctcgaccgaagaacgcgaccagtatctcaaggccgcgccctggaaggat
aacgagaacgctcccgaattgtccgccgaacgcatggccgaattcagcgcaaccgaggac
ttcatcctcaccgtttgcgccaacggctatggcaagcgctcgagcgcttatgaataccgc
cagtcgggccgcggtggccagggcattctcaatatcgacaatatcaagcgcaacggcacg
gtcgtcgccagcttccgcgcgtcggacgacgagcaggtcatgctggtcaccgaccaggcc
aagctgatccgcatgaaagttgcagatatgcgcgtgatcggccggaacagctcgggcgtc
aaactgttcaacgtcgcgcagggcgaacatgtcgtcggcgcagccaagattgacgaggaa
gaggaaccagaaaatgatgcggaagacgcggtggtcgaggaaatggtcgatcagggcgtt
tccgatggtgatgtcgcggtaacggacgataccggagatgaaacaccggaagacagttct
gaatga
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