Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01062
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Entry
SPHFLASMR4Y_01062 CDS
T04949
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_01062 (addA)
Enzymes [BR:
sfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPHFLASMR4Y_01062 (addA)
DNA repair and recombination proteins [BR:
sfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SPHFLASMR4Y_01062 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DUF2800
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ASK87831
UniProt:
A0A220W4U8
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All DBs
Position
complement(1104280..1107732)
Genome browser
AA seq
1150 aa
AA seq
DB search
MSSGKPKIFPLKDRQIDAVEPDAHIWLSASAGTGKTQVLTARVFRLLLTETVDPEHILCL
TFTKAGAAEMAERINRQLAAWVRMDDTLLENDLRAIGASTGPETRARARTLFARVLDAQG
GGLRIMTIHGFCQSLLASFPEEAGIASMFKPIEDRDQKILAREALGDLLLEEERAGRLQI
VEAIQRLSVRMGEEATEQFLMSCAAKADAMDGLPTGVLPFVRGVLGLPIDGDAQSWLAER
CADEAIDLRAITLLRDAMAEAGGKKEQERQLAIRLWLTLNPQERAAALSDIHLAWATKTT
GAPPKPTKGLLKVLPDYDFIAGSLFEWSNGLLEKAVLFEYADLFAGALEAGRAFYHRYAD
AKRLHGVVDFDDMIRMTARLLQKSDMAAWIRYKLDQRTDHILIDEAQDTNVAQWDIVRAL
AGEFFAGMGADPERHRTLFTVGDFKQAIFGFQGTSPHNYANARTEFFALADASEQRFGDL
SLDRSFRSTPPILEAVDATLEQISHEQLGLIEPIPEHRSNYQGASGSVTLWKPIANRSDA
DDEDEESWASEEKRVFAQKLALQIKKWLSPDNPLWLDRENRALQPKDILILVSKRDELSA
LIVARLFAEQVPVAGIDRIRLNQPLVVQDLLAAIRFVLQPHDDLNLASLLVSPLLGWSQE
DLLARGYRGKKDEEKSLWEFLRRQDRLGDHIKPLQQLLAMADFNTPYQFLETILSGAMQG
RCKLLARLSHAAVDPLDELLATALAFEQDHIPTLQGFLDWFDRGDVEIKREQVEGGNEVR
LMTVHGAKGLQAPLVILANATFDPASKKSGGFNIKLGEGTGLELEYPVVPVRKSERVGIL
AEHSAYADKVAMEEHWRLLYVAMTRAEEHLVVAGVLGPRAKGEVPELSWYGAIERGLIAL
GCDWQDNPEWLASREYRVESRNKPAVLPAIAPSADQESERTPAPDWLFRSAPEESRPPRP
LTPSHLGPDDASNPPPDMAMRDAAERGILLHSLFQRLPNIAPERRLDVADRWLEKQKQIG
DPARRAEIIKTVLAVMDNPVWSALFDPESLAEAPIAAVVGEHVISGTVDRLLITDDHIYV
VDFKTGRRVPDNAGQAPVAYLRQMAAYVVALEKIFPDRPIKAGLLYSHGPLMLEISPDLI
DRHKPGFESI
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcggcaagccgaaaatcttcccgctcaaggaccggcagattgatgcggtcgag
cccgatgctcatatctggctgagcgcgtccgccggcaccggtaagacgcaggtcctgacc
gcgagagtgttccgtctgttgctcacagagacggtcgatcccgaacatattctctgcctg
acctttaccaaggctggcgctgcggaaatggcagagcggatcaaccggcaactggccgcc
tgggtgcggatggacgatacgctgctggaaaatgatcttcgtgcaatcggcgcctcgacc
ggacccgaaaccagagcgcgcgcgcggactttatttgcccgcgtgctcgacgcccagggc
ggcggtctgaggatcatgacgattcatggtttctgccagtcgctgcttgcatcctttccc
gaagaggcgggcatcgcctcgatgttcaagccgatcgaggaccgcgaccagaagatattg
gcgcgcgaggctttgggtgatctgctgctcgaggaagaacgggccgggcgtctacagatt
gtcgaggcgatccagcggctcagcgtccggatgggcgaggaggcgaccgaacaatttttg
atgagctgcgcggccaaggctgatgcgatggatggactgcccaccggcgtcctgcctttt
gtccgcggggtgctcggcctgccgattgatggcgatgcgcagtcttggctggcggaacgc
tgcgcggacgaagcgattgacctgcgcgcgatcactctgttgcgtgatgccatggcggaa
gccggaggcaagaaggaacaggagcggcaattggcgatccgtctctggttgaccctcaac
ccgcaggaaagggccgcagcattatcggatattcatctggcctgggcgaccaaaaccacg
ggcgcgccgccgaaaccgaccaaaggcttgttaaaggttctgccggactatgattttatt
gccggttcgctgttcgaatggagcaacggcctgctcgaaaaagcggtgctgttcgaatat
gccgacctgttcgcgggcgcgctggaagcggggcgcgccttctaccaccgctatgccgac
gccaaaaggctgcacggcgtggtcgatttcgacgatatgatccggatgaccgcgaggctc
ttgcagaaaagcgatatggcggcctggatccgctacaagctagaccagcgcaccgatcat
atattgatcgacgaggcgcaggataccaatgtcgcgcaatgggatatcgtccgggcgctg
gccggcgagttttttgccggcatgggcgccgatccggaacgccaccggacgctgttcacg
gtcggcgatttcaagcaggcgatctttggctttcagggcaccagcccgcataattatgcc
aatgcgaggaccgaattttttgccttggccgacgcgtcggaacaaaggttcggcgacctg
tcgctggaccggagtttccgctcaaccccgcccattctggaagcggtcgatgccacgctg
gaacagatcagtcacgaacaactggggctgatcgaaccgatacccgagcatcgcagcaat
tatcagggcgcgagcggcagtgtgaccttgtggaagccgatagcgaacagaagcgacgct
gacgatgaagatgaggaatcctgggccagcgaggagaaacgggttttcgcccagaagctt
gcactgcagatcaagaaatggctgtcaccggacaatccgctatggctggaccgggaaaac
cgggctctgcagccgaaagacatattgatattggtgagcaagcgtgacgaactgagcgcg
ctgattgtggctcgcctgttcgccgagcaagtcccggtggccgggatcgaccggatccgt
ctcaaccagccgctggtggtgcaggacttgctggccgctatccgtttcgtgctgcagccc
catgatgatctcaatctcgccagcctgctggtttcgccgctgcttggctggagccaggag
gatttgctggctcgcggttatcgcggcaagaaggatgaagagaaaagcctctgggagttc
ttgcgcaggcaggaccgtcttggcgaccatatcaagccgctgcagcagctgctggcgatg
gccgatttcaatacgccctatcagtttctcgagacgatcctgtccggggcgatgcagggg
cggtgcaaattgctggcccggctcagccatgcggcggtcgacccgctcgacgagctgctg
gcaacggcgctggcctttgagcaggaccatatacccaccttgcagggttttcttgactgg
ttcgaccggggcgatgtcgaaatcaagcgcgaacaggtcgagggcggcaatgaagtgcgc
ctgatgaccgttcacggcgcaaaaggattgcaggcaccgctggtgatcctcgccaatgcg
acctttgaccctgcgagcaagaaaagcggcggcttcaatatcaaactcggcgaggggacc
ggtctggaactcgaatatccggtggtcccggttcgcaagtcggagcgcgtcggaatcttg
gctgaacattccgcctatgccgacaaggtcgcaatggaagaacattggcggctgctttat
gtcgcgatgacccgggcggaagagcatctcgttgtagccggtgtgctcggaccaagagca
aagggcgaagtgcccgagctaagctggtatggtgccatcgagcgcggcctgatcgctctc
ggctgcgactggcaggataacccggaatggttggcgtcgcgggaatatcgcgtcgagagc
cggaacaagcccgccgtcttgcctgcgattgccccaagcgctgatcaggaatcggagaga
acgcctgcaccggactggttattccgctcggcaccggaggaatcgcgaccaccgaggccc
ctgacaccctcgcatctcggccccgacgatgccagcaatccgccgcccgatatggccatg
cgcgacgctgccgaacgtggcatattgctgcacagtctgttccagcgtctgcccaatatc
gcaccggaacgccgactggatgtcgccgaccgctggctggaaaagcagaagcagattggc
gatccggcccggcgcgcagagattatcaagacggttctcgcggtcatggacaatccggtc
tggtccgctctttttgaccccgaaagcctggcagaagcgccgattgcagcggttgtcggc
gaacatgtcatttccggtacggtcgaccgattgctgatcaccgacgatcatatctatgtc
gtcgatttcaaaacgggccgccgggtgcctgataatgccggacaggcaccggtcgcctac
ctgcggcagatggcggcctatgttgtcgcgctggaaaagatattcccggaccgtccgatc
aaggccggactgctctattcgcacggtccgctaatgctggagatttcgcccgatctgatc
gaccggcacaagccgggctttgagtcgatatga
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