Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01149
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Entry
SPHFLASMR4Y_01149 CDS
T04949
Symbol
paaF
Name
(GenBank) 2,3-dehydroadipyl-CoA hydratase
KO
K13816
DSF synthase
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla02020
Two-component system
sfla02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPHFLASMR4Y_01149 (paaF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPHFLASMR4Y_01149 (paaF)
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Gene cluster
GFIT
Motif
Pfam:
ECH_1
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ASK87916
UniProt:
A0A220W513
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All DBs
Position
complement(1204110..1205063)
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AA seq
317 aa
AA seq
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MDFRSRAANELDRNVTIEANDMLVQTPPVAEQDIFSKQFSEIDLRFDRSDEIFWCYMNQK
SRPSYTYALGEEIQQVQDWIHSTYGTKSNQAADPLRYFVAASHTPGIYNLGGDLKHFADC
IRRRDLGALKKYARTCVHMQYENSTGFGAPIITMALVQGDALGGGFEHALAFDILVAEKS
ARLGLPEILFNLFPGMGAYSFLRQRLSRKETERFILEGKLYTGAQLYDMGVVDILADDGM
GEAAIVEYTKENRKRFHAERAVYRARKIANPVSLEELLEITDTWAETALYLEDADVRKME
RLASAQDRRIMRSLRAV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggactttcgcagtcgcgctgccaacgagttggatcgtaatgtgacgatcgaggcaaat
gacatgctcgtccagacaccaccggtcgcggaacaggatatattctcgaaacagttcagc
gagatcgacctgagatttgatcggtctgatgaaatattctggtgctatatgaaccagaaa
tcgcgtcccagttacacatatgcactgggcgaagagattcagcaggtacaggactggatc
cattccacctacgggaccaaaagtaatcaggctgccgacccgttgcgctattttgttgct
gcctcgcacaccccggggatctacaatctcggcggagacttgaaacattttgccgattgt
atccgtcgtcgtgaccttggggcattgaaaaaatacgcccgaacctgtgtccatatgcaa
tatgaaaacagcaccggctttggagcgccaatcatcacaatggctctggtgcagggcgat
gctctgggcggtggtttcgaacatgctctggcgttcgacatattggtggcagagaaaagc
gcgcgactgggattgccggaaatcctgttcaatctctttcccggaatgggcgcctacagc
tttctgcgacagcgtctcagccgcaaggagaccgagcgctttatactcgagggcaaatta
tatacgggggcccagctctacgacatgggtgtggtcgacatattggcagacgacggaatg
ggcgaagccgcgatcgtcgaatataccaaggaaaatcgcaaacgcttccatgccgagcgg
gctgtctatcgtgcccggaaaattgccaatccggtgagtctggaagagttgctcgaaatc
actgatacatgggccgaaaccgcgctctatctggaagatgcagacgtccgcaagatggag
cggctggcttcggcgcaagatcggcggataatgcggtcgctgcgggctgtctga
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