Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01181
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Entry
SPHFLASMR4Y_01181 CDS
T04949
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPHFLASMR4Y_01181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_01181
DNA repair and recombination proteins [BR:
sfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPHFLASMR4Y_01181
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPHFLASMR4Y_01181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ASK87947
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Position
complement(1241446..1242180)
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AA seq
244 aa
AA seq
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MPNLRTIAIICSVRSHGEHGAVVRSLTPENGLMSGYVRGAHSRMMRPVLIPSNIVQADYR
SRTEDQLASMTAELQLSRGPFLGEPLASAALDWVTALTAAILPEEHSYPQLYSALSALLD
AICGAPSAKGWAVALVRYELLLLSELGFGLTLDKCAVTGAAEDLVYISPKSATAVSAFAG
QEYKQRLLPLPALLKGAADAEWDDIFDGLRVTGFFLKRHFFDDRRKDVMAARTVLVDRLK
RVVA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaatctccgcacgatcgccatcatctgctcggttcgttcccacggcgagcatggg
gcggtggtgcgttcgctgacgcccgaaaatggcttgatgtccggctatgtgcgcggcgcg
cattcgcggatgatgcggcctgtgttgattccctccaatatcgtgcaggccgactatcgg
tcgcgaaccgaagatcagctggcctcgatgacggcggagttgcagcttagcaggggcccc
ttcctgggagagccgctggcgagtgcggcgctggactgggtgacggcgttgacggcggct
attctgccggaagaacatagttatccgcagctgtattcagctctctcggcgctgctggat
gcgatttgcggcgcgccgtctgcaaagggctgggcagtggctctggtgcgctatgaactg
ctgttgctctcggaactgggatttggtctgacgctggacaaatgtgcggtgacgggagca
gcggaggatctggtctatatcagcccgaagagcgccactgcggtcagcgcttttgcaggg
caggaatataagcagcgtctgctcccgcttcccgcccttctgaaaggggctgccgacgcc
gaatgggatgatattttcgatggtctgcgggtcaccggcttcttcctgaagcgccatttt
tttgacgaccgccgcaaggatgtgatggcggcgcgaacggtgttggtcgatcgattgaaa
agggtggttgcctaa
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